issues Search Results · repo:zoecastillo/microbiomeExplorer language:R
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inzoecastillo/microbiomeExplorer (press backspace or delete to remove)Thanks for this pipeline . I love it . 2 questions
1) how can one retrieve the code? ( want to see code that the GUI run )
2) It appears files of large sizes cannot be loaded ( you get and error ) . ...
senukobla
- 5
- Opened on Nov 24, 2023
- #12
cafferychen777I am trying several times to upload matrix file called: nares.csv; the following error always appears to me.
Warning: Error in scan: scan() expected a real , got 3.784190
2: shiny::runApp 1: runMicrobiomeExplorer ...
ManarRashad
- 1
- Opened on Oct 20, 2022
- #10
Hello,
I m having problems to generate reports. The error message that I m getting is this:
-- Sending report to C:\Users\Owner\AppData\Local\Temp\RtmpsFfPir -- -- Removing
C:\Users\Owner\AppData\Local\Temp\RtmpsFfPir/me_report.Rmd-- ...
DarrenLCY
- 10
- Opened on Dec 1, 2021
- #9
Hi, i used the microbiome explorer to generate a relative abundance for my data and got this Bar graph. (please find
attached) April 2018 RA top 10
i am looking for a way to filter the no match from the ...
Sandra-ctrl
- 7
- Opened on Jul 25, 2021
- #8
I am not able to generate the report in html and also unable to find what is going wrong? Could you please help me to
solve this issue?
udaydd
- 1
- Opened on Mar 2, 2021
- #7
Hi I can t seem to upload my otu_table.biom file on the Microbiome Explorer it sent the Error
Warning: Error in if: missing value where TRUE/FALSE needed
45: observer
2: shiny::runApp
1: runMicrobiomeExplorer ...
- 5
- Opened on Feb 28, 2021
- #6
Hi,
I was wondering how can I load the feature count data, phenotype info, and taxonomy info files using the R console and
not the GUI or shiny application. In tutorial, there is only the this option ...
Juliana-Soto24
- 1
- Opened on Feb 18, 2021
- #5
I am using R version 3.6.2
I tried installing MicrobiomeExplorer using the recommended installation method BiocManager::install(
zoecastillo/microbiomeExplorer , ref = master ) However, I got this error ...
idolawoye
- 1
- Opened on Jan 15, 2021
- #4
Hi!
Im trying to get the report and I get this error:
Listening on http://127.0.0.1:4554 -- Sending report to /var/folders/sy/4mzmjcq17txbv3vnznqk2v5c0000gn/T//RtmpHv8asR --
-- Removing /var/folders/sy/4mzmjcq17txbv3vnznqk2v5c0000gn/T//RtmpHv8asR/me_report.Rmd-- ...
ghost
- 8
- Opened on Jan 11, 2021
- #3
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