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Return --no-data-dir option to multiqc
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zjnolen committed Oct 25, 2024
1 parent d21eab6 commit 03420ae
Showing 1 changed file with 2 additions and 1 deletion.
3 changes: 2 additions & 1 deletion workflow/rules/2.1_sample_qc.smk
Original file line number Diff line number Diff line change
Expand Up @@ -108,7 +108,8 @@ rule qualimap_multiqc:
runtime="1h",
shell:
"""
multiqc {params.extra} --filename {output} {input} 2> {log}
multiqc {params.extra} --no-data-dir \
--filename {output} {input} 2> {log}
"""


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