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ychuest committed Sep 18, 2024
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Expand Up @@ -202,6 +202,7 @@ Awesome-LLMs-meet-genomes is a collection of state-of-the-art, novel, exciting L
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| 2024.07 ✨✨✨| **VQDNA: Unleashing the Power of Vector Quantization for Multi-Species Genomic Sequence Modeling** | ICML'24 | [link](https://arxiv.org/pdf/2405.10812) | [link](https://github.com/Lupin1998/VQDNA) |
| 2024.06 | **Caduceus: Bi-Directional Equivariant Long-Range DNA Sequence Modeling** | ICML’24 | [link](https://arxiv.org/abs/2403.03234) | [link](https://github.com/kuleshov-group/caduceus) |
| 2024.06 | **Contrastive pre-training for sequence based genomics models** | bioRxiv | [link](https://doi.org/10.1101/2024.06.10.598319) | [link](https://github.com/ksenia007/cGen) |
| 2024.05 🏋️🏋️ | **Self-Distillation Improves DNA Sequence Inference** | arXiv | [link](https://arxiv.org/abs/2405.08538) | [link](https://github.com/wiedersehne/FinDNA) |
| 2024.04 | **A Sparse and Wide Neural Network Model for DNA Sequences** | SRNN | [link](https://papers.ssrn.com/sol3/papers.cfm?abstract_id=4806928) | [link](https://github.com/wiedersehne/SwanDNA) |
| 2024.03 | **Self-supervised learning for DNA sequences with circular dilated convolutional networks** | Neural Networks | [link](https://doi.org/10.1016/j.neunet.2023.12.002) | [link](https://github.com/wiedersehne/cdilDNA) |
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