Analysis of Ostrea lurida gonad nucleotide sequences in control and ocean acidification conditions

Final FISH 546 Project, complete with results directory with finalized project results.

"Annotation of Ostrea lurida transcriptome" Version 1

Modifications since v0-alpha:

• Finished BLAST and kallisto analyses
• Ran DESeq2 to obtain differentially expressed genes between different treatments
• CoGe tutorial to examine differences in DNA methylation

In progress for v2:

• Modifying DESeq2 results

v0-alpha

Pre-release of "Annotation of Ostrea lurida transcriptome.

This release includes acquiring data files and running quality analysis. BLAST and kallisto analyses are in progress with clear descriptions of work to be done and anticipated analysis completion dates. Additionally, this release includes tutorials for different analytical tools and project background information.

v0 will be released 2016-11-07 after analyses described above are completed.