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Python 6 9 Updated Jun 29, 2023

Advanced Python Mastery (course by @dabeaz)

Python 10,803 1,813 Updated Aug 10, 2024

A new markup-based typesetting system that is powerful and easy to learn.

Rust 37,135 1,006 Updated Jan 31, 2025
Jupyter Notebook 9 Updated Jul 9, 2023

Transparent and robust SARS-CoV-2 variant calling and lineage assignment with comprehensive reporting.

Python 22 8 Updated Jan 21, 2025

Somatic structural variant caller for long-read data

Python 55 2 Updated Jan 31, 2025

Webserver for Planemo Training Development Kit

Python 4 2 Updated May 8, 2024

Clock using time quotes from the literature, based on the work of Jaap Meijers

R 635 118 Updated Oct 28, 2024

Tiling PCR primer scheme definitions

10 4 Updated Sep 4, 2024

A tool to create visual HTML reports from collections of CSV/TSV tables

Rust 104 7 Updated Jan 31, 2025

Carbon Language's main repository: documents, design, implementation, and related tools. (NOTE: Carbon Language is experimental; see README)

C++ 32,529 1,490 Updated Feb 1, 2025

A collection of modern/faster/saner alternatives to common unix commands.

31,517 791 Updated Sep 10, 2024

For finding, sharing and exchanging Data, Models, Simulations and Processes in Science.

Ruby 79 52 Updated Jan 31, 2025

Galaxy Workflows maintained by the Intergalactic Workflow Commission

Python 32 73 Updated Jan 31, 2025

Matrix Corporal: reconciliator and gateway for a managed Matrix server

Go 148 14 Updated Dec 8, 2024

A curated list of awesome public Galaxy histories

1 Updated Jun 19, 2021

A collection of Galaxy-related training material

HTML 318 928 Updated Feb 1, 2025

ENA upload tool - script your Open Data upload to the European Nucleotide Archive

Python 28 16 Updated Jan 27, 2025
Python 9 2 Updated Apr 14, 2021

Tool Shed repositories maintained by the Intergalactic Utilities Commission

HTML 167 445 Updated Jan 31, 2025

Data intensive science for everyone.

Python 1,441 1,014 Updated Jan 31, 2025

HyPhy: Hypothesis testing using Phylogenies

HyPhy 227 69 Updated Jan 28, 2025

Collection of scripts for automated SARS-CoV-2 genome surveillance.

Python 22 7 Updated Sep 19, 2023

Request execution of Galaxy SARS-CoV-2 variation analysis workflows on input data you provide.

Python 18 8 Updated Dec 13, 2021

Python library for RO-Crate

Jupyter Notebook 53 30 Updated Dec 20, 2024

Lifterover copy number segments in whole

Python 23 4 Updated Feb 6, 2024

Simple, lightweight, and magic-free static site/blog generator for Python coders

Python 1,830 305 Updated Mar 4, 2023

This not my project, just an old fork. Upstream is here

Rust 8 Updated May 4, 2019

Ongoing analysis of COVID-19 using Galaxy, BioConda and public research infrastructures

Jupyter Notebook 128 78 Updated Feb 3, 2023
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