Issues with rda() "triplot" vectors #659
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ArthurVDbio
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You have ordered factors which are expressed as linear ( |
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hope this is appropriate
CONTEXT
I use the function rda() to analyse morpho-ecological correlations; having morphological (shapes variables coming from geometric morphometrics) and ecological (10 variables, ordinal or nominal) datasets.
The code, cca.object seem to be okay and I double checked for the dataset and inputs.
ISSUE
The triplot showes vectors ('bp') with random added letters instead of the true factor level... L and Q are not factor levels and understanble for me.
I hope somebody can help.
Thanks in advance.
DETAILS
My basic functions:
rda<-rda(coords~.,data=traits.f)
plot(rda,scaling=2,display="bp")
The triplot:
![image](https://private-user-images.githubusercontent.com/145691869/269668564-faf9a7e2-cbf1-428e-b8c7-f3ba1a02a99e.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.eyJpc3MiOiJnaXRodWIuY29tIiwiYXVkIjoicmF3LmdpdGh1YnVzZXJjb250ZW50LmNvbSIsImtleSI6ImtleTUiLCJleHAiOjE3Mzg4MjI3NjQsIm5iZiI6MTczODgyMjQ2NCwicGF0aCI6Ii8xNDU2OTE4NjkvMjY5NjY4NTY0LWZhZjlhN2UyLWNiZjEtNDI4ZS1iOGM3LWYzYmExYTAyYTk5ZS5wbmc_WC1BbXotQWxnb3JpdGhtPUFXUzQtSE1BQy1TSEEyNTYmWC1BbXotQ3JlZGVudGlhbD1BS0lBVkNPRFlMU0E1M1BRSzRaQSUyRjIwMjUwMjA2JTJGdXMtZWFzdC0xJTJGczMlMkZhd3M0X3JlcXVlc3QmWC1BbXotRGF0ZT0yMDI1MDIwNlQwNjE0MjRaJlgtQW16LUV4cGlyZXM9MzAwJlgtQW16LVNpZ25hdHVyZT1iYzA0Y2Q2NWM0MWJiMjgxNTFjNTBmMjU4YjkyZTM2N2EzMzQyOTJjN2RlMGI1OGM1M2E1ODFkMWQwNzYyZTUxJlgtQW16LVNpZ25lZEhlYWRlcnM9aG9zdCJ9.-hjbKWP_h9U50GaoBTzVZbU4zf0zTHx1jkb7PBfh6_c)
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