From 0e63d7fb9351b650044180d9a30ed3ccbc47ad47 Mon Sep 17 00:00:00 2001
From: Bart Mesuere <Bart.Mesuere@UGent.be>
Date: Wed, 12 Feb 2020 08:49:20 +0100
Subject: [PATCH] Regenerate gemspec for version 2.1.0

---
 Rakefile        |  2 +-
 VERSION         |  2 +-
 unipept.gemspec | 50 +++++++++++++++++++++++++------------------------
 3 files changed, 28 insertions(+), 26 deletions(-)

diff --git a/Rakefile b/Rakefile
index 8abacd23..edb8b1e2 100644
--- a/Rakefile
+++ b/Rakefile
@@ -25,7 +25,7 @@ begin
     commands for handling proteins using the command line.
     EOS
     gem.email = 'unipept@ugent.be'
-    gem.authors = ['Toon Willems', 'Bart Mesuere', 'Tom Naessens']
+    gem.authors = ['Bart Mesuere', 'Pieter Verschaffelt', 'Toon Willems', 'Tom Naessens']
     gem.required_ruby_version = '>= 2.0.0'
   end
   Jeweler::RubygemsDotOrgTasks.new
diff --git a/VERSION b/VERSION
index 227cea21..7ec1d6db 100644
--- a/VERSION
+++ b/VERSION
@@ -1 +1 @@
-2.0.0
+2.1.0
diff --git a/unipept.gemspec b/unipept.gemspec
index 7976c0e8..c9504509 100644
--- a/unipept.gemspec
+++ b/unipept.gemspec
@@ -2,16 +2,16 @@
 # DO NOT EDIT THIS FILE DIRECTLY
 # Instead, edit Jeweler::Tasks in Rakefile, and run 'rake gemspec'
 # -*- encoding: utf-8 -*-
-# stub: unipept 2.0.0 ruby lib
+# stub: unipept 2.1.0 ruby lib
 
 Gem::Specification.new do |s|
   s.name = "unipept".freeze
-  s.version = "2.0.0"
+  s.version = "2.1.0"
 
   s.required_rubygems_version = Gem::Requirement.new(">= 0".freeze) if s.respond_to? :required_rubygems_version=
   s.require_paths = ["lib".freeze]
-  s.authors = ["Toon Willems".freeze, "Bart Mesuere".freeze, "Tom Naessens".freeze]
-  s.date = "2019-06-19"
+  s.authors = ["Bart Mesuere".freeze, "Pieter Verschaffelt".freeze, "Toon Willems".freeze, "Tom Naessens".freeze]
+  s.date = "2020-02-12"
   s.description = "    Command line interface to the Unipept (http://unipept.ugent.be) web services\n    (pept2lca, taxa2lca, pept2taxa, pept2prot and taxonomy) and some utility\n    commands for handling proteins using the command line.\n".freeze
   s.email = "unipept@ugent.be".freeze
   s.executables = ["unipept".freeze, "prot2pept".freeze, "peptfilter".freeze, "uniprot".freeze]
@@ -21,9 +21,9 @@ Gem::Specification.new do |s|
   ]
   s.files = [
     ".document",
+    ".github/workflows/ci.yml",
     ".rubocop.yml",
     ".ruby-version",
-    ".travis.yml",
     "Gemfile",
     "Gemfile.lock",
     "LICENSE.txt",
@@ -65,9 +65,14 @@ Gem::Specification.new do |s|
     "test/commands/test_uniprot.rb",
     "test/commands/unipept/test_api_runner.rb",
     "test/commands/unipept/test_config.rb",
+    "test/commands/unipept/test_pept2ec.rb",
+    "test/commands/unipept/test_pept2funct.rb",
+    "test/commands/unipept/test_pept2go.rb",
+    "test/commands/unipept/test_pept2interpro.rb",
     "test/commands/unipept/test_pept2lca.rb",
     "test/commands/unipept/test_pept2prot.rb",
     "test/commands/unipept/test_pept2taxa.rb",
+    "test/commands/unipept/test_peptinfo.rb",
     "test/commands/unipept/test_taxa2lca.rb",
     "test/commands/unipept/test_taxonomy.rb",
     "test/helper.rb",
@@ -83,34 +88,31 @@ Gem::Specification.new do |s|
   s.homepage = "http://unipept.ugent.be".freeze
   s.licenses = ["MIT".freeze]
   s.required_ruby_version = Gem::Requirement.new(">= 2.0.0".freeze)
-  s.rubygems_version = "3.0.1".freeze
+  s.rubygems_version = "2.7.7".freeze
   s.summary = "Command line interface to Unipept web services.".freeze
 
   if s.respond_to? :specification_version then
     s.specification_version = 4
 
     if Gem::Version.new(Gem::VERSION) >= Gem::Version.new('1.2.0') then
-      s.add_runtime_dependency(%q<cri>.freeze, ["~> 2.15.3"])
-      s.add_runtime_dependency(%q<typhoeus>.freeze, ["~> 1.1"])
-      s.add_development_dependency(%q<coveralls>.freeze, ["~> 0"])
-      s.add_development_dependency(%q<minitest>.freeze, ["~> 5.7"])
-      s.add_development_dependency(%q<rake>.freeze, ["~> 10.4"])
-      s.add_development_dependency(%q<rubocop>.freeze, ["~> 0.32"])
+      s.add_runtime_dependency(%q<cri>.freeze, ["~> 2.15.10"])
+      s.add_runtime_dependency(%q<typhoeus>.freeze, ["~> 1.3.1"])
+      s.add_development_dependency(%q<minitest>.freeze, ["~> 5.14"])
+      s.add_development_dependency(%q<rake>.freeze, ["~> 13.0.1"])
+      s.add_development_dependency(%q<rubocop>.freeze, ["~> 0.79.0"])
     else
-      s.add_dependency(%q<cri>.freeze, ["~> 2.15.3"])
-      s.add_dependency(%q<typhoeus>.freeze, ["~> 1.1"])
-      s.add_dependency(%q<coveralls>.freeze, ["~> 0"])
-      s.add_dependency(%q<minitest>.freeze, ["~> 5.7"])
-      s.add_dependency(%q<rake>.freeze, ["~> 10.4"])
-      s.add_dependency(%q<rubocop>.freeze, ["~> 0.32"])
+      s.add_dependency(%q<cri>.freeze, ["~> 2.15.10"])
+      s.add_dependency(%q<typhoeus>.freeze, ["~> 1.3.1"])
+      s.add_dependency(%q<minitest>.freeze, ["~> 5.14"])
+      s.add_dependency(%q<rake>.freeze, ["~> 13.0.1"])
+      s.add_dependency(%q<rubocop>.freeze, ["~> 0.79.0"])
     end
   else
-    s.add_dependency(%q<cri>.freeze, ["~> 2.15.3"])
-    s.add_dependency(%q<typhoeus>.freeze, ["~> 1.1"])
-    s.add_dependency(%q<coveralls>.freeze, ["~> 0"])
-    s.add_dependency(%q<minitest>.freeze, ["~> 5.7"])
-    s.add_dependency(%q<rake>.freeze, ["~> 10.4"])
-    s.add_dependency(%q<rubocop>.freeze, ["~> 0.32"])
+    s.add_dependency(%q<cri>.freeze, ["~> 2.15.10"])
+    s.add_dependency(%q<typhoeus>.freeze, ["~> 1.3.1"])
+    s.add_dependency(%q<minitest>.freeze, ["~> 5.14"])
+    s.add_dependency(%q<rake>.freeze, ["~> 13.0.1"])
+    s.add_dependency(%q<rubocop>.freeze, ["~> 0.79.0"])
   end
 end