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  1. utdal/ATACSeq-NextFlow-Pipeline utdal/ATACSeq-NextFlow-Pipeline Public

    This is an automated workflow pipeline for analyzing bulk ATAC-seq data, implemented primarily in bash scripts, and wrapped in a NextFlow workflow.

    Shell 1

  2. utdal/Bulk-RNA-Seq-Nextflow-Pipeline utdal/Bulk-RNA-Seq-Nextflow-Pipeline Public

    This is an automated workflow pipeline for analyzing and processing Bulk-RNA seq data, implemented primarily in bash, python and R, and wrapped in a NextFlow workflow to characterize the gene lands…

    Nextflow

  3. Normalize-H-and-E-images Normalize-H-and-E-images Public

    A method for normalizing H and E images

    Jupyter Notebook

  4. BLAST-Search BLAST-Search Public

    Search and Alignment Tool in Bioinformatics Domain

    Shell

  5. utdal/TRAP-Analysis utdal/TRAP-Analysis Public

    TRAP-Analysis tool enables the investigation of cell-specific mRNA associations with ribosomes obtained from Translating Ribosome Affinity Purification (TRAP) sequencing.

    Python

  6. Natural-Language-Processing Natural-Language-Processing Public

    Jupyter Notebook