Code

add vignettes#56

Code

Merged

alkaZeltser merged 24 commits intomainuclahs-cds/package-ApplyPolygenicScore:mainfrom nzeltser-add-vignettesuclahs-cds/package-ApplyPolygenicScore:nzeltser-add-vignettesCopy head branch name to clipboardJul 26, 2024

+648-82

Commits

Commits on Jul 16, 2024

• initiate vignette infra

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Commits on Jul 17, 2024

• User Guide Section 1

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• add option to only perform input vaildation in PGS function

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Commits on Jul 18, 2024

• basic APGS function usage

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Commits on Jul 19, 2024

• missing genotype methods

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• add more example data for vignette

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• phenotype data

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• pgs density

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• scatter and rank plots

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• add vignette graphics

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• update docs

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• NEWS filename change

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• lintr fixes

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  0d147bf

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• remove vignette template

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• format edits

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• format edits

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• add test for new validation output

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• update documentation

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• lintr fixes

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• markdown features

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• change NEWS to markdown

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• update manual

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Commits on Jul 23, 2024

• typo fixes

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Commits on Jul 26, 2024

• handle temp files fo rplots

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