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our_requirements.txt
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our_requirements.txt
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# This file presents the complete python environment used by authors
# when developing the code, in case that some one comes across this
# repo wanting to reproduce the results. It includes many other
# packages which are not used in the code base.
argon2-cffi==20.1.0
ase==3.20.1
async-generator==1.10
attrs==20.2.0
backcall==0.2.0
bleach==3.2.1
cached-property==1.5.2
certifi==2020.6.20
cffi==1.14.3
chardet==3.0.4
cycler==0.10.0
Cython==0.29.21
decorator==4.4.2
defusedxml==0.6.0
easydict==1.9
entrypoints==0.3
future==0.18.2
h5py==3.0.0
idna==2.10
imageio==2.9.0
importlib-metadata==2.0.0
iniconfig==1.1.1
ipykernel==5.3.4
ipython==7.19.0
ipython-genutils==0.2.0
ipywidgets==7.5.1
isodate==0.6.0
jedi==0.17.2
Jinja2==2.11.2
joblib==0.17.0
jsonschema==3.2.0
jupyter==1.0.0
jupyter-client==6.1.7
jupyter-console==6.2.0
jupyter-core==4.6.3
jupyterlab-pygments==0.1.2
kiwisolver==1.2.0
llvmlite==0.34.0
MarkupSafe==1.1.1
matplotlib==3.3.2
mistune==0.8.4
nbclient==0.5.1
nbconvert==6.0.7
nbformat==5.0.8
nest-asyncio==1.4.2
networkx==2.5
notebook==6.1.4
numba==0.51.2
numpy==1.19.3
opencv-python==4.4.0.44
packaging==20.4
pandas==1.1.4
pandocfilters==1.4.3
parso==0.7.1
pexpect==4.8.0
pickleshare==0.7.5
Pillow==8.0.1
pluggy==0.13.1
prometheus-client==0.8.0
prompt-toolkit==3.0.8
protobuf==3.13.0
ptyprocess==0.6.0
py==1.10.0
pyamg==4.0.0
pybind11==2.6.2
pycocotools==2.0.2
pycparser==2.20
pydensecrf @ git+https://github.com/lucasb-eyer/pydensecrf.git@4d5343c398d75d7ebae34f51a47769084ba3a613
Pygments==2.7.2
pyparsing==2.4.7
pyrsistent==0.17.3
pytest==6.2.2
python-dateutil==2.8.1
pytz==2020.1
PyWavelets==1.1.1
PyYAML==3.12
pyzmq==19.0.2
qtconsole==4.7.7
QtPy==1.9.0
rdflib==5.0.0
requests==2.24.0
scikit-image==0.18.1
scikit-learn==0.24.1
scipy==1.6.1
Send2Trash==1.5.0
six==1.15.0
tensorboardX==2.1
terminado==0.9.1
testpath==0.4.4
threadpoolctl==2.1.0
tifffile==2020.10.1
toml==0.10.2
torch==1.5.0+cu101
torch-cluster==1.5.7
torch-geometric==1.6.1
torch-scatter==2.0.5
torch-sparse==0.6.7
torch-spline-conv==1.2.0
torchvision==0.6.0+cu101
tornado==6.1
tqdm==4.51.0
traitlets==5.0.5
urllib3==1.25.11
wcwidth==0.2.5
webencodings==0.5.1
widgetsnbextension==3.5.1
zipp==3.4.0