Skip to content

Normalize the number of reads from each input file #12

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
tseemann opened this issue Aug 12, 2019 · 1 comment
Open

Normalize the number of reads from each input file #12

tseemann opened this issue Aug 12, 2019 · 1 comment
Assignees
Labels
enhancement New feature or request

Comments

@tseemann
Copy link
Owner

Subsample the input reads to the smallest input file
Or scale the results

@tseemann tseemann added the enhancement New feature or request label Aug 12, 2019
@tseemann tseemann self-assigned this Aug 12, 2019
@tseemann
Copy link
Owner Author

We actually want to normalize kmers as read lengths can differ?

datamash --header-in sum 2 sum 3 < kmers.tsv

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
enhancement New feature or request
Projects
None yet
Development

No branches or pull requests

1 participant