Workflow for Simulation and Automatic Semantic Segmentation of Electron Microscopy Images

TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram averaging.

Functions for analysis of high resolution electron microscopy and spectroscopy data.

Fast multi-threaded hyperspectral total variational denoising

This repository holds Python scripts used for day-to-day data analysis required by my graduate degree.

Control and Automation of Transmission Electron Microscopes

Alt V Server template Roleplay Created by kysta Dev

A MATLAB codebase to analyze TEM images of soot, which includes new methods associated with this project and a compilation of other pre-existing methods into a single package.

A 3D finite-difference transient electromagnetic modeling open-source software, with a MATLAB version, a Fortran version and a Python version.

An algorithm that carries out both large-loop and small-loop TEM modeling.

S/TEM Automated Nanoparticle Analysis

Python wrapper for the scripting interface of Thermo Fisher Scientific and FEI microscopes.

A template repository used for building cli

Jython script templates for DTSA-II for simulating energy-dispersive x-ray spectroscopy (EDS)

Strain relaxation from a TEM foil using FEM

A plugin for the Xicam scientific data visualization and analysis software. Developed by the National Center for Electron Microscopy (NCEM).

Set of Digital Micrograph, Matlab and Python tools for the acquisition and pre-processing of Electron Diffraction data

Deep-Learning-Based Segmentation of Small Extracellular Vesicles in Transmission Electron Microscopy Images

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