Pangenome openness from k-mers or genes
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Jan 16, 2025 - C
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pangenome-analysis
Here are 9 public repositories matching this topic...
rust-bedtools but from the pangenome point of view.
bioinformatics algorithm genome-annotation bedtools bioinformatics-algorithms pangenome pangenome-analysis
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Jan 15, 2025 - Rust
rust pangenome graph analyze
bioinformatics genome-analysis pangenome-graph pangenome-analysis genome-analysis-annotation pangenome-alignment pangenome-graphs
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Jan 15, 2025 - Rust
This repository contains scripts used to collect and analyze data from whole genome sequences of clinical Streptococcus agalactiae (Group B Strep) isolates for the project described in the following manuscript: Pell, M.E. et al., bioRxiv, 2024-04-01.
variant-calling whole-genome-sequencing antibiotic-resistance virulence-genes streptococcus-agalactiae bacterial-genomics pangenome-analysis
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Jun 17, 2024 - R
rust pangenome bedtools vcf
bioinformatics genome-analysis vcf-files pangenome pangenome-analysis genome-annotation-analysis pangenome-variants pangenome-vcf
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Jan 15, 2025 - Rust
rust pangenome snatcher
bioinformatics genome-analysis pangenome pangenome-inference pangenome-analysis genome-analysis-annotation
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Dec 13, 2024 - Rust
rust deeplearning and segmentation from the aligned reads
bioinformatics genome-analysis pangenome pangenome-inference pangenome-analysis genome-analysis-annotation
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Dec 10, 2024 - Rust
🧐Handbook for NGS data analysis
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Jan 9, 2025 - HTML
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