A standalone interactive application for detecting biological significance on a set of genes
TransPi – a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly
A comprehensive gene set function enrichment tool for multiple species.
Pipeline to identify repetitive elements on non-model species genomes.
PABLOG: a Primer Analysis tool using a Bee-Like approach on Orthologous Genes
This project features a pipeline for Gene Ontology (GO) enrichment analysis on candidate genes with functional transcriptome annotations. It identifies enriched Biological Processes (BP), Cellular Components (CC), and Molecular Functions (MF), using R and Python to create 2D treemaps and interactive 3D visualizations of GO terms.
Nextflow pipeline for de novo hifi genome assembly for Daphnia obtusa
Collection of code that maps IDs and does enrichment.
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