Provides an user interface to BLAST on Tripal sites.
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Updated
Oct 8, 2024 - PHP
Provides an user interface to BLAST on Tripal sites.
A phylogenetics web app
divide blast query and run all chunks across HPC or localhost in parallelly
Automating NCBI BLAST requests from FASTQ/FASTA/GENBANK files to format into a readable file, graph representation and more!
I developed the "National Centre for Biotechnology Information" project to create a comprehensive and user-friendly platform for accessing and exploring a wealth of biotechnological information. Utilizing HTML, CSS, and Bootstrap, I designed a responsive web application that ensures seamless accessibility across various devices and screen sizes.
Parse binary files from Cblaster into more useful information
This is the repository for the Assignments of Practical Bioinformatics Course
The official Seqs-Extractor Repository
Assign taxonomy with blast, can be used for qiime
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
This tiny piece of program helps you transferring NCBI Blast result to spreadsheet. You just need to download the Blast result in a single JSON file.
Small project to use NCBI and RDP websites for Sequence alignments using Selenium for Python
Interactive Visual Output and Functional Predictions visualisations for Job Dispatcher tool outputs
Django website project for common sequence search tools.
This module extends the Tripal Analysis Module and provides a method for loading XML results from the NCBI blast program. Blast results appear on each feature page.
G-BLASTN is a GPU-accelerated nucleotide alignment tool based on the widely used NCBI-BLAST.
Efficiently keep track of changes to genomes
Annotate sequences by BLAST using NCBI taxonomy information
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