htslib
Here are 34 public repositories matching this topic...
The fastest VCF/BCF parser in R https://doi.org/10.1093/bioinformatics/btae049
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Oct 8, 2024 - C
Process Illumina instrument data into SAM/BAM/CRAM files.
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Oct 1, 2024 - C
a C++ API of htslib to be easily integrated and safely used. More importantly, it can be callled seamlessly in R/Python/Julia etc.
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Sep 26, 2024 - C++
cython + htslib == fast VCF and BCF processing
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Sep 16, 2024 - Cython
nim wrapper for htslib for parsing genomics data files
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Aug 27, 2024 - Nim
SeqAn's official repository.
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Aug 16, 2024 - C++
BigWig manpulation tools using libBigWig and htslib
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Aug 8, 2024 - C
C++ htslib/bwa-mem/fermi interface for interrogating sequence data
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Aug 9, 2024 - C++
HTSlib bindings for Crystal
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May 2, 2024 - Crystal
htslib for the zig build system
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Feb 20, 2024 - Zig
Use simple expressions to filter a BAM/CRAM file
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Feb 10, 2024 - C
Graph realignment tools for structural variants
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Dec 8, 2022 - C++
Collection of simple C scripts for parsing vcf or bam files using the htslib C library. These scripts can be used as the starting point for more complex scripts
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Dec 11, 2020 - C
VCF/Bcf genotypes filtering using htslib
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Nov 18, 2020 - C
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