A library for parentage analysis using efficiently computed opposing homozygote counts.
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Oct 28, 2022 - C#
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homozygosity
Here are 5 public repositories matching this topic...
Using gnomad-browser's GraphQL updated API to retrieve total joint allele frequencies, exome/genome allele frequencies and homozygote counts as well as population specific numbers for a batch of variants.
python mutations batch variants population population-genomics batch-processing allele-frequencies gnomad homozygosity
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Jun 12, 2024 - Python
Analysis of long continuous stretches of homozygosity of the human genome.
python bioinformatics microarray genome-analysis bioinformatics-analysis lcsh microarray-data-analysis homozygosity cromosome
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Mar 19, 2023 - Jupyter Notebook
ROHMMCLI - Flexible HMM based homozygosity predictor.
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Oct 5, 2023 - Java
A command-line parser for VCF files designed for population genetics analyses.
parsing genetics vcf population-genomics population-genetics genotype vcf-files allele-frequencies alleles diversity-measures heterozygosity vcf-format homozygosity diversity-analysis vcfparser
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Apr 14, 2023 - Java
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