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biomedical-ontologies

Here are 7 public repositories matching this topic...

clinical_informatics_umls

rcolinp / clinical_informatics_umls

An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being a free UMLS license holder. This repo will subset 2021AB UMLS native release, introduce/build upon UMLS provided tools to load a configured subset into first a relational database --> MySQL, SQLite, PostgreSQL…

python neo4j rdf semantic-web ontology biomedical-informatics interoperability knowledge-graph graph-database umls py2neo neosemantics biomedical-ontologies medical-terminology

Updated Mar 20, 2024
Python

PROconsortium / PRoteinOntology

obo obofoundry biomedical-ontologies protein-ontology

Updated Dec 6, 2024
HTML

besteves4 / duo-odrl-dpv

Repository with ODRL policies for DUO concepts and demo implementation of the odrl:Offer - odrl:Request matching algorithm for DUO

policy health-data gdpr odrl dpv biomedical-ontologies regulatory-compliance data-use-ontology

Updated Oct 21, 2024
Python

monarch-initiative / pheval.llm

Analysis of LLMs for Clinical Observations

hpo monarchinitiative phenopackets clinical-diagnosis biomedical-ontologies rare-diseases large-language-models

Updated Dec 17, 2024
Python

bio-ontology-research-group / EmbedPVP

EmbedPVP: Embedding-based Phenotype Variant Predictor

bioinformatics variant-analysis neuro-symbolic biomedical-ontologies prioritization-algorithm genomic-variants knowledge-enhanced-learning

Updated Apr 4, 2024
Python

ocimido

sap218 / ocimido

An ontology for ocular immune-mediated inflammatory diseases

owl ontology disorder synonyms disease tf-idf diseases ophthalmology inflammatory inflammation ocular biomedical-ontologies layman-terms patient-voice

Updated Oct 15, 2021

sap218 / coid

Combined Ontology for Inflammatory Diseases

owl ontology disorder disease phenotype phenotypes diseases disorders inflammatory inflammation biomedical-ontologies

Updated Apr 20, 2022

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