Differential expression analysis of vegetative vs. resting stage Skeletonema marinoi under darkness and anoxia

Analysis scripts for [add DOI when available]

Directories:

• 00_data - Files regarding the RNAseq data
• 01_mapping - Files regarding mapping of the RNAseq data to the reference genome
• 02_assembly - Notes from attempted de novo assembly of transcriptome
• 04_DiffExp - Files regarding the differential expression analysis
• 08_GenesToLookFor - Heatmaps used in the publication
• 10_FinalResults - Slightly outdated results summaries, based on an earlier annotation than that used in the publication