-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathWurfbainia-villosa_NC044746.gb
5417 lines (5416 loc) · 335 KB
/
Wurfbainia-villosa_NC044746.gb
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
LOCUS NC_044746 164068 bp DNA circular PLN 03-APR-2023
DEFINITION Wurfbainia villosa isolate Y19017 chloroplast, complete genome.
ACCESSION NC_044746
VERSION NC_044746.1
DBLINK BioProject: PRJNA927338
KEYWORDS RefSeq.
SOURCE chloroplast Wurfbainia villosa
ORGANISM Wurfbainia villosa
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Zingiberales;
Zingiberaceae; Wurfbainia.
REFERENCE 1 (bases 1 to 164068)
AUTHORS Cui,Y., Chen,X., Nie,L., Sun,W., Hu,H., Lin,Y., Li,H., Zheng,X.,
Song,J. and Yao,H.
TITLE Comparison and Phylogenetic Analysis of Chloroplast Genomes of
Three Medicinal and Edible Amomum Species
JOURNAL Int J Mol Sci 20 (16), E4040 (2019)
PUBMED 31430862
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 164068)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (20-SEP-2019) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 164068)
AUTHORS Yao,H. and Cui,Y.
TITLE Direct Submission
JOURNAL Submitted (13-JUN-2019) Identification Center, Institute of
Medicinal Plant Development, Chinese Academy of Medical Sciences &
Peking Union Medical College, No. 151, Malianwa North Road, Beijing
100193, China
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to MN067431.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..164068
/organism="Wurfbainia villosa"
/organelle="plastid:chloroplast"
/mol_type="genomic DNA"
/isolate="Y19017"
/db_xref="taxon:199627"
gene complement(join(103278..104086,74180..74293))
/gene="rps12"
/locus_tag="F6C55_pgp043"
/old_locus_tag="Y19017_066"
/trans_splicing
/db_xref="GeneID:41799954"
CDS complement(join(103278..103304,103856..104086,
74180..74293))
/gene="rps12"
/locus_tag="F6C55_pgp043"
/old_locus_tag="Y19017_066"
/trans_splicing
/codon_start=1
/transl_table=11
/product="ribosomal protein S12"
/protein_id="YP_009693849.1"
/db_xref="GeneID:41799954"
/translation="MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYTITPKK
PNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTL
DAVGVKDRQQGRSQYGVKKPK"
gene complement(127..1188)
/gene="psbA"
/locus_tag="F6C55_pgp001"
/old_locus_tag="Y19017_001"
/db_xref="GeneID:41799887"
CDS complement(127..1188)
/gene="psbA"
/locus_tag="F6C55_pgp001"
/old_locus_tag="Y19017_001"
/codon_start=1
/transl_table=11
/product="photosystem II protein D1"
/protein_id="YP_009693850.1"
/db_xref="GeneID:41799887"
/translation="MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTA
TSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASV
DEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAAAAVFLI
YPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSL
VTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLA
AWPVIGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHER
NAHNFPLDLAAVEVSSTNG"
gene complement(1473..4231)
/gene="trnK-UUU"
/locus_tag="F6C55_pgt001"
/old_locus_tag="Y19017_002"
/db_xref="GeneID:41799822"
tRNA complement(join(1473..1507,4195..4231))
/gene="trnK-UUU"
/locus_tag="F6C55_pgt001"
/old_locus_tag="Y19017_002"
/product="tRNA-Lys"
/db_xref="GeneID:41799822"
exon complement(1473..1507)
/gene="trnK-UUU"
/locus_tag="F6C55_pgt001"
/old_locus_tag="Y19017_002"
/number=2
intron complement(1508..4194)
/gene="trnK-UUU"
/locus_tag="F6C55_pgt001"
/old_locus_tag="Y19017_002"
/number=1
gene complement(1811..3358)
/gene="matK"
/locus_tag="F6C55_pgp087"
/old_locus_tag="Y19017_003"
/db_xref="GeneID:41799823"
CDS complement(1811..3358)
/gene="matK"
/locus_tag="F6C55_pgp087"
/old_locus_tag="Y19017_003"
/codon_start=1
/transl_table=11
/product="maturase K"
/protein_id="YP_009693851.1"
/db_xref="GeneID:41799823"
/translation="MEELQGYLEEYRSRQQQFLYPLLFQEYIYAFAYDHGLNSSIFYE
PQNSLGYDNKFSSVLVKRLIIRMYQKNYWIYSVNDIYQNIFVGHNNYFYFHFFSQILS
EGFAVIVEIPFSLQLISSLEEKEIPKSHNLQSSHSIFPFLEDKLLHLNYLSDILIPYP
AHMEILVQMLQSWIQDVLSLHLLQFLLHEYYNWNNLIIPNKSIYVFSKDNKRLFCFLY
NLYIYEYEFLLVFPCKQSSFLRLISSGVLLERIHFYVKIEHLGVCRIFCQKTLWIFKD
PFIHYIRYQGKSILGSRGTHFLMKKWKYHLVHFWQYYFHFWSQPYRIDIKKLSNYSFY
FLGYFSSVQMNSSMVRNQMLENSFVMDTLTNKFDTRIPIIPLIRSLSKAQFCTVSGYP
ISKPIWTDLADCDIINRFGRICRKLSHYHSGSSKKQSLYRMKYILRLSCARTLARKHK
SSARSFLQRLSSGLLEEFFTEEEKVISLIFPKITSFYLYGSYRERIWYLDIIRINDLV
NSLLVTT"
exon complement(4195..4231)
/gene="trnK-UUU"
/locus_tag="F6C55_pgt001"
/old_locus_tag="Y19017_002"
/number=1
gene complement(5083..6067)
/gene="rps16"
/locus_tag="F6C55_pgp086"
/old_locus_tag="Y19017_004"
/db_xref="GeneID:41799824"
CDS complement(join(5083..5300,6028..6067))
/gene="rps16"
/locus_tag="F6C55_pgp086"
/old_locus_tag="Y19017_004"
/codon_start=1
/transl_table=11
/product="ribosomal protein S16"
/protein_id="YP_009693852.1"
/db_xref="GeneID:41799824"
/translation="MVKLRLKRCGRKQRAIYRIVAIDVRSRREGRDLRKVGFYDPINN
QTYSNVPAILYFLEKGAQPTGTVYDIFRKADLFKEKISSSV"
exon complement(5083..5300)
/gene="rps16"
/locus_tag="F6C55_pgp086"
/old_locus_tag="Y19017_004"
/number=2
intron complement(5301..6027)
/gene="rps16"
/locus_tag="F6C55_pgp086"
/old_locus_tag="Y19017_004"
/number=1
exon complement(6028..6067)
/gene="rps16"
/locus_tag="F6C55_pgp086"
/old_locus_tag="Y19017_004"
/number=1
gene complement(7439..7510)
/gene="trnQ-UUG"
/locus_tag="F6C55_pgt002"
/old_locus_tag="Y19017_005"
/db_xref="GeneID:41799825"
tRNA complement(7439..7510)
/gene="trnQ-UUG"
/locus_tag="F6C55_pgt002"
/old_locus_tag="Y19017_005"
/product="tRNA-Gln"
/db_xref="GeneID:41799825"
gene 7921..8106
/gene="psbK"
/locus_tag="F6C55_pgp085"
/old_locus_tag="Y19017_006"
/db_xref="GeneID:41799826"
CDS 7921..8106
/gene="psbK"
/locus_tag="F6C55_pgp085"
/old_locus_tag="Y19017_006"
/codon_start=1
/transl_table=11
/product="photosystem II protein K"
/protein_id="YP_009693853.1"
/db_xref="GeneID:41799826"
/translation="MLNIFSLICICLNSVLYSNSFFFAKLPEAYAVFNPIVDVMPVIP
LFFFLLAFVWQAAVSFR"
gene 8635..8745
/gene="psbI"
/locus_tag="F6C55_pgp084"
/old_locus_tag="Y19017_007"
/db_xref="GeneID:41799827"
CDS 8635..8745
/gene="psbI"
/locus_tag="F6C55_pgp084"
/old_locus_tag="Y19017_007"
/codon_start=1
/transl_table=11
/product="photosystem II protein I"
/protein_id="YP_009693854.1"
/db_xref="GeneID:41799827"
/translation="MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPRREE"
gene complement(8881..8968)
/gene="trnS-GCU"
/locus_tag="F6C55_pgt003"
/old_locus_tag="Y19017_008"
/db_xref="GeneID:41799828"
tRNA complement(8881..8968)
/gene="trnS-GCU"
/locus_tag="F6C55_pgt003"
/old_locus_tag="Y19017_008"
/product="tRNA-Ser"
/db_xref="GeneID:41799828"
gene 9878..10649
/gene="trnG-UCC"
/locus_tag="F6C55_pgt004"
/old_locus_tag="Y19017_009"
/db_xref="GeneID:41799829"
tRNA join(9878..9900,10603..10649)
/gene="trnG-UCC"
/locus_tag="F6C55_pgt004"
/old_locus_tag="Y19017_009"
/product="tRNA-Gly"
/db_xref="GeneID:41799829"
exon 9878..9900
/gene="trnG-UCC"
/locus_tag="F6C55_pgt004"
/old_locus_tag="Y19017_009"
/number=1
intron 9901..10602
/gene="trnG-UCC"
/locus_tag="F6C55_pgt004"
/old_locus_tag="Y19017_009"
/number=1
exon 10603..10649
/gene="trnG-UCC"
/locus_tag="F6C55_pgt004"
/old_locus_tag="Y19017_009"
/number=2
gene 10776..10847
/gene="trnR-UCU"
/locus_tag="F6C55_pgt005"
/old_locus_tag="Y19017_010"
/db_xref="GeneID:41799830"
tRNA 10776..10847
/gene="trnR-UCU"
/locus_tag="F6C55_pgt005"
/old_locus_tag="Y19017_010"
/product="tRNA-Arg"
/db_xref="GeneID:41799830"
gene complement(10962..12485)
/gene="atpA"
/locus_tag="F6C55_pgp083"
/old_locus_tag="Y19017_011"
/db_xref="GeneID:41799831"
CDS complement(10962..12485)
/gene="atpA"
/locus_tag="F6C55_pgp083"
/old_locus_tag="Y19017_011"
/codon_start=1
/transl_table=11
/product="ATP synthase CF1 alpha subunit"
/protein_id="YP_009693855.1"
/db_xref="GeneID:41799831"
/translation="MVTLRADEISNIIRERIEQYTREVKIVNTGTVLQVGDGIARIHG
LDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSE
GYLGRVINALAKPIDGRGEISSSESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPI
GRGQRELIIGDRQTGKTAVATDTILNQKGQNVICVYVAIGQKASSVAQVVTTFQERGA
LEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSL
LLRRPPGREAYPGDVFYLHSRLLERAAKSSSSLGEGSMTALPIVETQSGDVSAYIPTN
VISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFVE
LEAFAQFASDLDKTTQNQLARGQRLRELLKQSQSDPLAVEEQIATIYTGANGYLDSIE
LGQVKKFLGQLRNYLKKNKPQFQEIISSTKTFTEEAESLLKEVIQQQIELFLLQEQT"
gene complement(12550..13903)
/gene="atpF"
/locus_tag="F6C55_pgp082"
/old_locus_tag="Y19017_012"
/db_xref="GeneID:41799832"
CDS complement(join(12550..12960,13760..13903))
/gene="atpF"
/locus_tag="F6C55_pgp082"
/old_locus_tag="Y19017_012"
/codon_start=1
/transl_table=11
/product="ATP synthase CF0 subunit I"
/protein_id="YP_009693856.1"
/db_xref="GeneID:41799832"
/translation="MKNVIDSFVYLGHWPSAGSFGFNTDILATNPINLSVVLGVLIYF
GKGVLNDLLDNRKQRILSTIRNSEELRKGVVEQLERARTRLRKVEIEADEYRMNGYSE
IEREKVNLINATSDSLEQLENYKNETLHFEQEKAINQVRQRVFQQALQGALGTLNSCL
NSELHFRMIRANIRILGAMQKITD"
exon complement(12550..12960)
/gene="atpF"
/locus_tag="F6C55_pgp082"
/old_locus_tag="Y19017_012"
/number=2
intron complement(12961..13759)
/gene="atpF"
/locus_tag="F6C55_pgp082"
/old_locus_tag="Y19017_012"
/number=1
exon complement(13760..13903)
/gene="atpF"
/locus_tag="F6C55_pgp082"
/old_locus_tag="Y19017_012"
/number=1
gene complement(14414..14659)
/gene="atpH"
/locus_tag="F6C55_pgp081"
/old_locus_tag="Y19017_013"
/db_xref="GeneID:41799833"
CDS complement(14414..14659)
/gene="atpH"
/locus_tag="F6C55_pgp081"
/old_locus_tag="Y19017_013"
/codon_start=1
/transl_table=11
/product="ATP synthase CF0 subunit III"
/protein_id="YP_009693857.1"
/db_xref="GeneID:41799833"
/translation="MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPE
AEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV"
gene complement(15835..16578)
/gene="atpI"
/locus_tag="F6C55_pgp080"
/old_locus_tag="Y19017_014"
/db_xref="GeneID:41799834"
CDS complement(15835..16578)
/gene="atpI"
/locus_tag="F6C55_pgp080"
/old_locus_tag="Y19017_014"
/codon_start=1
/transl_table=11
/product="ATP synthase CF0 subunit IV"
/protein_id="YP_009693858.1"
/db_xref="GeneID:41799834"
/translation="MNVIPCSIKTLKGLYDISGVEVGQHLYWQIGGLQIHAQVLITSW
VVIAILLGSVIIAVRNPQTIPNNGQNFFEYILEFIRDLSKTQIGEEYGPWVPFIGTMF
LFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGY
FGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMF
LGLFTSGIQALIFATLAAAYIGESMEGHH"
gene complement(16852..17568)
/gene="rps2"
/locus_tag="F6C55_pgp079"
/old_locus_tag="Y19017_015"
/db_xref="GeneID:41799835"
CDS complement(16852..17568)
/gene="rps2"
/locus_tag="F6C55_pgp079"
/old_locus_tag="Y19017_015"
/codon_start=1
/transl_table=11
/product="ribosomal protein S2"
/protein_id="YP_009693859.1"
/db_xref="GeneID:41799835"
/translation="MTRRYWNINLEEMMEAGVHFGHGTKKWNPRMAPYISAKRKGIHI
INLTRTARFLSEACDLVFDAASRGRTFLIVGTKNKAADSVASAAIRARCHYVNKKWLG
GMLTNWSTTETRLQKIRDLRAEQKMGKLNRLHKRDAAILKRKLFTLQTYLGGIKYMTR
LPDIVIIVDQQEEYTALRECVILGIPTICLIDTNCDPDLADISIPSNDDAIASIRLVL
NKLVSAICEGRSSYIRNPGL"
gene complement(17807..21943)
/gene="rpoC2"
/locus_tag="F6C55_pgp078"
/old_locus_tag="Y19017_016"
/db_xref="GeneID:41799836"
CDS complement(17807..21943)
/gene="rpoC2"
/locus_tag="F6C55_pgp078"
/old_locus_tag="Y19017_016"
/codon_start=1
/transl_table=11
/product="RNA polymerase beta subunit"
/protein_id="YP_009693860.1"
/db_xref="GeneID:41799836"
/translation="MAERADLVFHNKVINGTAMKRLISRLIDHFGMAYTSHILDQVKT
LGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIE
IWYATSEYLRQEMNPNFRMTDPSNPVHLMSFSGARGNASQIHQLVGMRGLMSDPQGQM
IDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIIRRT
DCGTIRGISVRPQNGMTEKIFVQTLIGRVLADDIYIGLRCLATRNQDIGIGLINRFIT
FRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
RTFHTGGVFTGGTAEYVRAPSNGKIKWNENLVHPTRTRHGHPAFLCSMDLYVTIESRD
ILHNVNIPLKSLILVQNNQYVESEQVIAEIRAGTSTFYFKEKVRKHIYSESEGEMHWS
TDVHHAPEYTYGNVHLLLKTSHLWILAGGSCRSSIVSFSLHKDQDQMNPHAFSVEERY
ISDLSMTNGRVRYKLLDTSDKKDKKILDYSTRPDQTISNGHWNFIYPSIIQGNSYSLA
KKRRNRFIIPLQYDQKRENELIPCFGISIEIPKQGILRRNSILAFFDDPRYRRKNSGI
TKYGTVEVNSIIKKEDLIEYRGSKEFIPKYQMKVDRFFFILEEVHILPGSSLIMVQNN
SIIGVDTQLALNTRSRVGGLVRLERKKKNIELKIFSGDIYFPGEADKISRHSGIFIPP
KTEKKNSKESKKLKNWIYVQRITPTKKKYFVSVRPVVTYEITDGINLATLFPQDLLRE
KDNVQLRVVNYILYGNGKSIRGIFHTSIQLVRTCLILNWDPEQNGSPKEIRASFIEVK
GNDLIRNFMRIELVKSSISYIGKRYDRASSGLISDNGLDRTNINPFYCKVSIQLLTQH
QGTIGTLLNRNKECQSLIILSSSNCSRIGPFNGSKYNMIKESDPIIPIKDLLCPLGTI
VPKMVNLYSFYHLITYNQILLKKYLLLGNFKQTFQVLQVLKYCLIDENRSIYNPDPCS
NIILNSFHLNWHFLHHDYWEETSTIISLGQFFCENVCLFKCEPHIKKSGQIIIVDVDA
LIIRSAKPYLATPGATIHGHYGKIFYEGDTLVTFIYEKSRSGDITQGLPKVEQILEVR
SIDSISMNLERRIEGWNKGIPKIFGIPWGFLIQAELTIAQSHISLVNKIQRVYRSQGV
QIHNRHIEIIVRQVTSKVLVSEDGMSNVFSPGELIGLLRAERVGRALDEAISYRAILL
GITRTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKK
FVHHSSKDKNFYLEIKRKNLFDLEIKDLLLHHGELFCSYVPNNLHETLEQSFTRFHDS
"
gene complement(22134..24926)
/gene="rpoC1"
/locus_tag="F6C55_pgp077"
/old_locus_tag="Y19017_017"
/db_xref="GeneID:41799837"
CDS complement(join(22134..23771,24495..24926))
/gene="rpoC1"
/locus_tag="F6C55_pgp077"
/old_locus_tag="Y19017_017"
/codon_start=1
/transl_table=11
/product="RNA polymerase beta"
/protein_id="YP_009693861.1"
/db_xref="GeneID:41799837"
/translation="MIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGKVTKPYTFH
YKTNKPEKDGLFCERISGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFIDSRIRRY
QMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDGTYLNFCFARPIAKKP
TFLRLRGLFEYEIQSRKYSIPLFFTTPVFETFRNREISTGAGAIREQLADSDLRIITS
NSLVEWKELGEKGSTGNEWEDRKIRRRKDFLVRRMKLAKHFSRTNVEPEWMVLCLLPV
LPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQ
EAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVIVVG
PSLSLHQCGLPREIAIELLQTFVIRGLIRQHVASNIGIAKSKIREKEPIVWEILQEVM
QGHPVLLNRAPTLHRLGIQAFQPILVVGSAICLHPLVCKGFNADFDGDQMAVHVPLSL
EAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYLLTIGNRRGICANRYNPYNSG
NYQKKIVDNHNNNYRYTREKEPHFSSSYDALGAYRQKRISLDSPLWLRWRRDQRVIGS
REVPIEVQYESLGTYHEIYGHYLIVGSITKEIRSIYIRTTLGHISFYRELEEAIQGFC
RAYSYAI"
exon complement(22134..23771)
/gene="rpoC1"
/locus_tag="F6C55_pgp077"
/old_locus_tag="Y19017_017"
/number=2
intron complement(23772..24494)
/gene="rpoC1"
/locus_tag="F6C55_pgp077"
/old_locus_tag="Y19017_017"
/number=1
exon complement(24495..24926)
/gene="rpoC1"
/locus_tag="F6C55_pgp077"
/old_locus_tag="Y19017_017"
/number=1
gene complement(24953..28174)
/gene="rpoB"
/locus_tag="F6C55_pgp076"
/old_locus_tag="Y19017_018"
/db_xref="GeneID:41799838"
CDS complement(24953..28174)
/gene="rpoB"
/locus_tag="F6C55_pgp076"
/old_locus_tag="Y19017_018"
/codon_start=1
/transl_table=11
/product="RNA polymerase beta subunit"
/protein_id="YP_009693862.1"
/db_xref="GeneID:41799838"
/translation="MLWDDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIED
TDQEIEFKLFVERYQLVEPSINERNAVYESLTYSSELYVPAGLIWKTGRDMQEETIFI
GNIPIMNSLGTFIINGIYRIVINQILQSPGIYYRSELDHNGISVYTSTIISDWGGRSE
LEIDRKSRIWARVSRKQKISILVLSSAMGSNLREILDNVCYPEIFLSFLNDKEKKKIG
SKESAILEFYQQFACVGGDPIFSESLCKELQKKFFQQRCELGRIGRRNMNRRLNLDIP
QNNTFLLPRDVLAAVDHLIGMKFGMGTLDDMNHLKNKRIRSIADLLQDQFGLALVRLE
NAVRGTISGAIRHKLIPTPQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGR
KLSYLGPGGLTGKTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGS
IKSPFYEISERSKKEAQIVYLSPNRDEYYRVAAGNSLALNQSIQEEQVVPARYRQEFL
TIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQSERCIVG
TGLERQTALDSGVSAIAEHEGKIIYTDPDKILFASNGDTTISIPLVICQRSNKNTCMH
QKPQVSRGKCIKKGQILADGAATVAGELALGKNVLVAYMPWEGYNFEDAVLISERLVY
EDIYTSFHIRKYEIKTHMTSQGPERITREIPHLEAHLLRNLDRNGVVMLGSWVETGDI
LVGKLRPQTANESSYAPEDRLLRAILGIQVSTAKETSLKLPTGGRGRVIDVRWIRKKG
GSCYNLEMIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGTPVDMVFN
PLGVPSRMNVGQIFECSLGLAGDLLKRHYRIASFDERYEQEASRKLVFSELYEASKQT
KNPWVFEPEYPGKSRIFDGRTGNPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALV
TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGATIIGG
RVSNPEDAPESFRLLVRELRSLAIELNHFLVSEKNFQINRKEA"
gene 29366..29436
/gene="trnC-GCA"
/locus_tag="F6C55_pgt006"
/old_locus_tag="Y19017_019"
/db_xref="GeneID:41799839"
tRNA 29366..29436
/gene="trnC-GCA"
/locus_tag="F6C55_pgt006"
/old_locus_tag="Y19017_019"
/product="tRNA-Cys"
/db_xref="GeneID:41799839"
gene 30300..30389
/gene="petN"
/locus_tag="F6C55_pgp075"
/old_locus_tag="Y19017_020"
/db_xref="GeneID:41799840"
CDS 30300..30389
/gene="petN"
/locus_tag="F6C55_pgp075"
/old_locus_tag="Y19017_020"
/codon_start=1
/transl_table=11
/product="cytochrome b6/f complex subunit VIII"
/protein_id="YP_009693863.1"
/db_xref="GeneID:41799840"
/translation="MDIVSLAWAALMVVFTFSLSLVVWGRSGL"
gene complement(31700..31804)
/gene="psbM"
/locus_tag="F6C55_pgp074"
/old_locus_tag="Y19017_021"
/db_xref="GeneID:41799841"
CDS complement(31700..31804)
/gene="psbM"
/locus_tag="F6C55_pgp074"
/old_locus_tag="Y19017_021"
/codon_start=1
/transl_table=11
/product="photosystem II protein M"
/protein_id="YP_009693864.1"
/db_xref="GeneID:41799841"
/translation="MEVNILAFIATALFILVPTAFLLIIYVKTVSQND"
gene complement(32889..32962)
/gene="trnD-GUC"
/locus_tag="F6C55_pgt007"
/old_locus_tag="Y19017_022"
/db_xref="GeneID:41799842"
tRNA complement(32889..32962)
/gene="trnD-GUC"
/locus_tag="F6C55_pgt007"
/old_locus_tag="Y19017_022"
/product="tRNA-Asp"
/db_xref="GeneID:41799842"
gene complement(33445..33528)
/gene="trnY-GUA"
/locus_tag="F6C55_pgt008"
/old_locus_tag="Y19017_023"
/db_xref="GeneID:41799843"
tRNA complement(33445..33528)
/gene="trnY-GUA"
/locus_tag="F6C55_pgt008"
/old_locus_tag="Y19017_023"
/product="tRNA-Tyr"
/db_xref="GeneID:41799843"
gene complement(33583..33655)
/gene="trnE-UUC"
/locus_tag="F6C55_pgt009"
/old_locus_tag="Y19017_024"
/db_xref="GeneID:41799844"
tRNA complement(33583..33655)
/gene="trnE-UUC"
/locus_tag="F6C55_pgt009"
/old_locus_tag="Y19017_024"
/product="tRNA-Glu"
/db_xref="GeneID:41799844"
gene 34497..34568
/gene="trnT-GGU"
/locus_tag="F6C55_pgt010"
/old_locus_tag="Y19017_025"
/db_xref="GeneID:41799845"
tRNA 34497..34568
/gene="trnT-GGU"
/locus_tag="F6C55_pgt010"
/old_locus_tag="Y19017_025"
/product="tRNA-Thr"
/db_xref="GeneID:41799845"
gene 35885..36946
/gene="psbD"
/locus_tag="F6C55_pgp073"
/old_locus_tag="Y19017_026"
/db_xref="GeneID:41799846"
CDS 35885..36946
/gene="psbD"
/locus_tag="F6C55_pgp073"
/old_locus_tag="Y19017_026"
/codon_start=1
/transl_table=11
/product="photosystem II protein D2"
/protein_id="YP_009693865.1"
/db_xref="GeneID:41799846"
/translation="MTITIGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYF
ALGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDF
TRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI
YPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGAT
VENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVP
VTGLWMSAIGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQD
QPHENLIFPEEVLPRGNAL"
gene 36894..38315
/gene="psbC"
/locus_tag="F6C55_pgp072"
/old_locus_tag="Y19017_027"
/db_xref="GeneID:41799847"
CDS 36894..38315
/gene="psbC"
/locus_tag="F6C55_pgp072"
/old_locus_tag="Y19017_027"
/codon_start=1
/transl_table=11
/product="photosystem II CP43 chlorophyll apoprotein"
/protein_id="YP_009693866.1"
/db_xref="GeneID:41799847"
/translation="MKTLYSLRRFYHVETLFNGTLTLAGRDQETTGFAWWAGNARLIN
LSGKLLGAHVAHAGLIVFWAGAMNLFEVSHFVPEKPMYEQGLILLPHLATLGWGVGPG
GEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTI
LGIHLILLGLGAFLLVLKALYFGGIYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPF
GGEGWIVSVDDLEDIIGGHVWLGAICILGGIWHILTKPFAWARRAFVWSGEAYLSYSL
GALSIFGFTACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGP
TGLGKYLMRSPTGEIIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERRS
AEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFFFVGHLWHAGRARA
AAAGFEKGIDRDFEPVLSMTPLR"
gene complement(38459..38550)
/gene="trnS-UGA"
/locus_tag="F6C55_pgt011"
/old_locus_tag="Y19017_028"
/db_xref="GeneID:41799848"
tRNA complement(38459..38550)
/gene="trnS-UGA"
/locus_tag="F6C55_pgt011"
/old_locus_tag="Y19017_028"
/product="tRNA-Ser"
/db_xref="GeneID:41799848"
gene 38921..39109
/gene="psbZ"
/locus_tag="F6C55_pgp071"
/old_locus_tag="Y19017_029"
/db_xref="GeneID:41799849"
CDS 38921..39109
/gene="psbZ"
/locus_tag="F6C55_pgp071"
/old_locus_tag="Y19017_029"
/codon_start=1
/transl_table=11
/product="photosystem II reaction center Z protein"
/protein_id="YP_009693867.1"
/db_xref="GeneID:41799849"
/translation="MTIAFQLAVFALIATSSVLLISVPVVFASSDSWSSNKNIVFSGT
SLWIGLVFLVAILNSLIS"
gene 39370..39440
/gene="trnG-GCC"
/locus_tag="F6C55_pgt012"
/old_locus_tag="Y19017_030"
/db_xref="GeneID:41799850"
tRNA 39370..39440
/gene="trnG-GCC"
/locus_tag="F6C55_pgt012"
/old_locus_tag="Y19017_030"
/product="tRNA-Gly"
/db_xref="GeneID:41799850"
gene complement(39616..39689)
/gene="trnfM-CAU"
/locus_tag="F6C55_pgt013"
/old_locus_tag="Y19017_031"
/db_xref="GeneID:41799851"
tRNA complement(39616..39689)
/gene="trnfM-CAU"
/locus_tag="F6C55_pgt013"
/old_locus_tag="Y19017_031"
/product="tRNA-Met"
/db_xref="GeneID:41799851"
gene complement(39846..40148)
/gene="rps14"
/locus_tag="F6C55_pgp070"
/old_locus_tag="Y19017_032"
/db_xref="GeneID:41799852"
CDS complement(39846..40148)
/gene="rps14"
/locus_tag="F6C55_pgp070"
/old_locus_tag="Y19017_032"
/codon_start=1
/transl_table=11
/product="ribosomal protein S14"
/protein_id="YP_009693868.1"
/db_xref="GeneID:41799852"
/translation="MARKSLIHREKKRQKLEQKYHLIRRSSKKKISKVSSLSEKWEIH
VKLQSPPRNSAPTRLHRRCFLTGRPRANHRDFGISGHILREMFHTCLLPGAIRSSW"
gene complement(40292..42496)
/gene="psaB"
/locus_tag="F6C55_pgp069"
/old_locus_tag="Y19017_033"
/db_xref="GeneID:41799853"
CDS complement(40292..42496)
/gene="psaB"
/locus_tag="F6C55_pgp069"
/old_locus_tag="Y19017_033"
/codon_start=1
/transl_table=11
/product="photosystem I P700 apoprotein A2"
/protein_id="YP_009693869.1"
/db_xref="GeneID:41799853"
/translation="MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQ
NIFASHFGQLAIIFLWTSGNLFHVAWQGNFESWIQDPLHVRPIAHAIWDPHFGQPAVE
AFTRGGATGPVNIAYSGVYQWWYTIGLRTNEDLYTGALFLLFLSAISLIAGWLHLQPK
WKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPGSRGQYVRWNNFLDVLPH
PQGLGPLFTGQWNLYAQNPDSSSHLFSTSQGAGTAILTLLGGFHPQTQSLWLTDIAHH
HLAIAILFLIAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQL
GLALASLGVITSLVAQHMYSLPAYAFIAQDFTTQAALYTHHQYIAGFIMTGAFAHGAI
FFIRDYNPEQNEDNVLARMLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPE
KQILIEPIFAQWIQSAHGKTSYGFDVLLSSTNGPAFDAGRSIWLPGWLNAVNENSNSL
FLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGG
TCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHITLWQGNVSQFNESSTYLMGWLRDYL
WLNSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAH
ERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG"
gene complement(42522..44774)
/gene="psaA"
/locus_tag="F6C55_pgp068"
/old_locus_tag="Y19017_034"
/db_xref="GeneID:41799854"
CDS complement(42522..44774)
/gene="psaA"
/locus_tag="F6C55_pgp068"
/old_locus_tag="Y19017_034"
/codon_start=1
/transl_table=11
/product="photosystem I P700 apoprotein A1"
/protein_id="YP_009693870.1"
/db_xref="GeneID:41799854"
/translation="MIIRSPEPEVKIVVDRDPIKTSFEEWARPGHFSRTIAKGPDTTT
WIWNLHADAHDFDSHTSDLEEISRKVFSAHFGQLSIIFLWLSGMYFHGARFSNYEAWL
SDPTHIAPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRASGITNELQLYCTA
IGALVFASLMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQIHVS
LPINQFLDAGVDPKEIPLPHEFILNRNLLAQLYPSFAEGATPFFTLNWSKYAEFLTFR
GGLDPITGGLWLTDIAHHHLAIAILFLIAGHMYRTNWGIGHGLKDILEAHKGPFTGQG
HKGLYEILTTSWHAQLSLNLAMLGSLTIVVAHHMYSMPPYPYLAIDYGTQLSLFTHHM
WIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSF
GLYIHNDTMSALGRPQDMFSDTAIQLQPILAQWVQNTHALAPDITAPGATASTSLTWG
GGELVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKAN
LGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGTISDQG
VVTHITGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLSAYGLFFLGAHFVWAFSL
MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWA
FFLARIIAVG"
gene complement(45417..47418)
/gene="ycf3"
/locus_tag="F6C55_pgp067"
/old_locus_tag="Y19017_035"
/db_xref="GeneID:41799855"
CDS complement(join(45417..45569,46347..46576,47292..47418))
/gene="ycf3"
/locus_tag="F6C55_pgp067"
/old_locus_tag="Y19017_035"
/codon_start=1
/transl_table=11
/product="hypothetical chloroplast RF34"
/protein_id="YP_009693871.1"
/db_xref="GeneID:41799855"
/translation="MPRSQINANFIDKTSSIVANILLRIIPTTSGEKKAFTYYRDGGM
LAQSEGNYAEALQNYYEATRPEIDPYDRSYILYNIGLIHTSNGEHTRALEYYFRALER
NPFLPQAFNNMAVICHYRGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQN
WLKITRRFE"
exon complement(45417..45569)
/gene="ycf3"
/locus_tag="F6C55_pgp067"
/old_locus_tag="Y19017_035"
/number=3
intron complement(45570..46346)
/gene="ycf3"
/locus_tag="F6C55_pgp067"
/old_locus_tag="Y19017_035"
/number=2
exon complement(46347..46576)
/gene="ycf3"
/locus_tag="F6C55_pgp067"
/old_locus_tag="Y19017_035"
/number=2
intron complement(46577..47291)
/gene="ycf3"
/locus_tag="F6C55_pgp067"
/old_locus_tag="Y19017_035"
/number=1
exon complement(47292..47418)
/gene="ycf3"
/locus_tag="F6C55_pgp067"
/old_locus_tag="Y19017_035"
/number=1
gene 48059..48145
/gene="trnS-GGA"
/locus_tag="F6C55_pgt014"
/old_locus_tag="Y19017_036"
/db_xref="GeneID:41799856"
tRNA 48059..48145
/gene="trnS-GGA"
/locus_tag="F6C55_pgt014"
/old_locus_tag="Y19017_036"
/product="tRNA-Ser"
/db_xref="GeneID:41799856"
gene complement(48435..49040)
/gene="rps4"
/locus_tag="F6C55_pgp066"
/old_locus_tag="Y19017_037"
/db_xref="GeneID:41799857"
CDS complement(48435..49040)
/gene="rps4"
/locus_tag="F6C55_pgp066"
/old_locus_tag="Y19017_037"
/codon_start=1
/transl_table=11
/product="ribosomal protein S4"
/protein_id="YP_009693872.1"
/db_xref="GeneID:41799857"
/translation="MSRYRGPRFKKIRRLGTLPGLTSKRPRSGSDPKNQLRSGKRSQY
RIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGIAS
TIPGARQLVNHRHILVNGGIVDIPSYRCKPRDIITTKNKQRSKALIQNYISLSPHEEL
PKHLTFDSFQYKGVVNQIVDSKWIGLKINELLVVEYYSRQT"
gene complement(49467..49539)
/gene="trnT-UGU"
/locus_tag="F6C55_pgt015"
/old_locus_tag="Y19017_038"
/db_xref="GeneID:41799858"
tRNA complement(49467..49539)
/gene="trnT-UGU"
/locus_tag="F6C55_pgt015"
/old_locus_tag="Y19017_038"
/product="tRNA-Thr"
/db_xref="GeneID:41799858"
gene 50625..51241
/gene="trnL-UAA"
/locus_tag="F6C55_pgt016"
/old_locus_tag="Y19017_039"
/db_xref="GeneID:41799859"
tRNA join(50625..50659,51192..51241)
/gene="trnL-UAA"
/locus_tag="F6C55_pgt016"
/old_locus_tag="Y19017_039"
/product="tRNA-Leu"
/db_xref="GeneID:41799859"
exon 50625..50659
/gene="trnL-UAA"
/locus_tag="F6C55_pgt016"
/old_locus_tag="Y19017_039"
/number=1
intron 50660..51191
/gene="trnL-UAA"
/locus_tag="F6C55_pgt016"
/old_locus_tag="Y19017_039"
/number=1
exon 51192..51241
/gene="trnL-UAA"
/locus_tag="F6C55_pgt016"
/old_locus_tag="Y19017_039"
/number=2
gene 51568..51640
/gene="trnF-GAA"
/locus_tag="F6C55_pgt017"
/old_locus_tag="Y19017_040"
/db_xref="GeneID:41799860"
tRNA 51568..51640
/gene="trnF-GAA"
/locus_tag="F6C55_pgt017"
/old_locus_tag="Y19017_040"
/product="tRNA-Phe"
/db_xref="GeneID:41799860"
gene complement(52225..52704)
/gene="ndhJ"
/locus_tag="F6C55_pgp065"
/old_locus_tag="Y19017_041"
/db_xref="GeneID:41799861"
CDS complement(52225..52704)
/gene="ndhJ"
/locus_tag="F6C55_pgp065"
/old_locus_tag="Y19017_041"
/codon_start=1
/transl_table=11
/product="NADH-plastoquinone oxidoreductase subunit J"
/protein_id="YP_009693873.1"
/db_xref="GeneID:41799861"
/translation="MQQDRLSDWLVKHELVHRSLGFDCQGIEILQIKTEDWDSIAVIS
YVYGYNFLRSQCAYDVAPGGFLASVYHLTRIEYDIDKPEEVCIKVFAPRNNPRIPSVF
WIWRSADFQERESYDMLGILYYNHPRLKRILMPESWIGWPLRKDYITPNFYEIQDAH"
gene complement(52808..53560)
/gene="ndhK"
/locus_tag="F6C55_pgp064"
/old_locus_tag="Y19017_042"
/db_xref="GeneID:41799862"
CDS complement(52808..53560)
/gene="ndhK"
/locus_tag="F6C55_pgp064"
/old_locus_tag="Y19017_042"
/codon_start=1
/transl_table=11
/product="NADH-plastoquinone oxidoreductase subunit K"
/protein_id="YP_009693874.1"
/db_xref="GeneID:41799862"
/translation="MVLTKYSYNQKKKEGKDYIETVMNLIEFPLLDKITTNSVISTTL
NDLSNWLRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGT
VTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPG
CPPKPEAVIDAITKLRKKISREILEDRTVSQQENRCFTTNHKFYVRRSIHTGNYDQEL
LYQSASTSEILSETFFQSKSSVSPPELVNQER"
gene complement(53551..53913)
/gene="ndhC"
/locus_tag="F6C55_pgp063"
/old_locus_tag="Y19017_043"
/db_xref="GeneID:41799863"
CDS complement(53551..53913)
/gene="ndhC"
/locus_tag="F6C55_pgp063"
/old_locus_tag="Y19017_043"
/codon_start=1
/transl_table=11
/product="NADH-plastoquinone oxidoreductase subunit 3"
/protein_id="YP_009693875.1"
/db_xref="GeneID:41799863"
/translation="MFLLHEYDIFWAFLIISSIIPILAFVISGVLAPVREGPEKLSSY
ESGIEPMGDAWLQFRIRYYMFALVFVIFDVETVFLYPWAMSFDVLGVSVFIEAFIFVL
IPIVGSVYAWRKGALEWS"
gene complement(55641..56319)
/gene="trnV-UAC"
/locus_tag="F6C55_pgt018"
/old_locus_tag="Y19017_044"
/db_xref="GeneID:41799864"
tRNA complement(join(55641..55677,56282..56319))
/gene="trnV-UAC"
/locus_tag="F6C55_pgt018"
/old_locus_tag="Y19017_044"
/product="tRNA-Val"
/db_xref="GeneID:41799864"
exon complement(55641..55677)
/gene="trnV-UAC"
/locus_tag="F6C55_pgt018"
/old_locus_tag="Y19017_044"
/number=2
intron complement(55678..56281)
/gene="trnV-UAC"
/locus_tag="F6C55_pgt018"
/old_locus_tag="Y19017_044"
/number=1
exon complement(56282..56319)
/gene="trnV-UAC"
/locus_tag="F6C55_pgt018"
/old_locus_tag="Y19017_044"
/number=1
gene 56508..56579
/gene="trnM-CAU"
/locus_tag="F6C55_pgt019"
/old_locus_tag="Y19017_045"
/db_xref="GeneID:41799865"
tRNA 56508..56579
/gene="trnM-CAU"
/locus_tag="F6C55_pgt019"
/old_locus_tag="Y19017_045"
/product="tRNA-Met"
/db_xref="GeneID:41799865"
gene complement(56764..57171)
/gene="atpE"
/locus_tag="F6C55_pgp062"
/old_locus_tag="Y19017_046"
/db_xref="GeneID:41799866"
CDS complement(56764..57171)
/gene="atpE"
/locus_tag="F6C55_pgp062"
/old_locus_tag="Y19017_046"
/codon_start=1
/transl_table=11
/product="ATP synthase CF1 epsilon subunit"
/protein_id="YP_009693876.1"
/db_xref="GeneID:41799866"
/translation="MTLNLCVLTPNRIIWDSEVKEIILSTNSGQIGVLPNHAPIATAV
DIGLLRIRLNNDQWLTVALMGGFARIGNNEITILGNDAEISTDIDPQEAQQALEIAEA
NLSGAEGKRQAIEANLALRRARTRVEAVNVISY"
gene complement(57168..58655)
/gene="atpB"
/locus_tag="F6C55_pgp061"
/old_locus_tag="Y19017_047"
/db_xref="GeneID:41799867"
CDS complement(57168..58655)
/gene="atpB"
/locus_tag="F6C55_pgp061"
/old_locus_tag="Y19017_047"
/codon_start=1
/transl_table=11
/product="ATP synthase CF1 beta subunit"
/protein_id="YP_009693877.1"
/db_xref="GeneID:41799867"
/translation="MRINPTPSSPAVSTQNLGRIAQIIGPVLDVVFPPGKMPNIYNAL
VVKGRDTVGQQINVTCEVQQLLGNNRVRTVAMSATDGLTRGMEVIDTGAPLSIPVGGA
TLGRIFNVLGEPVDNLGPVDTSTTSPIHRLAPAFIELDTKLSIFETGIKVVDLLAPYR
RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGV
INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV
QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDP
APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTS
QRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAE
TIRGFQLILSGELDSLPEQAFYLVGNIDEATAKAINLEEEGKLKK"
gene 59453..60916
/gene="rbcL"
/locus_tag="F6C55_pgp060"
/old_locus_tag="Y19017_048"
/db_xref="GeneID:41799868"
CDS 59453..60916
/gene="rbcL"
/locus_tag="F6C55_pgp060"
/old_locus_tag="Y19017_048"
/codon_start=1
/transl_table=11
/product="ribulose 1,5-bisphosphate carboxylase/oxygenase
large subunit"
/protein_id="YP_009693878.1"
/db_xref="GeneID:41799868"
/translation="MSCREGLMSPQTETKAFVGFKAGVKDYKLTYYTPDYEVKDTDIL
AAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEAVIGEDN
QYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPTSYSKTFQGPPH
GIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPF
MRWRDRFVFCAEALYKAQAETGEIKGHYLNATAGTCEEMMKRAIFARELGVPIVMHDY
LTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIH
AGTVVGKLEGEREMTLGFVDLLRDDFIEKDRSRGIFFTQDWVSMPGVIPVASGGIHVW
HMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNE
IIREASKWSPELAAACEVWKEIKFEFEPVDKLDKEKS"