Does meiosis have some impact on RNA velocity? #861
Unanswered
jiangpuxuan
asked this question in
Q&A
Replies: 0 comments 1 reply
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
-
I used my scRNA-seq data of germ cells to run
scvelo + cellrank
pipeline, but the results of cellrankIdentify initial/terminal states
did not meets the marker gene expression at all.Many researches, for example, Single-Cell RNA Sequencing of the Cynomolgus
Macaque Testis Reveals Conserved Transcriptional
Profiles during Mammalian Spermatogenesis ran
scvelo
on only on a subset (only contains germ cells befor meiosis) instead of on the whole dataset ( consists of early germ cells, meiosis germ cells, spermatids...., etc.).Thus, I really want to know if there is something related to meiosis, interfering such RNA velocity analysis.
Thank you for your help!
Beta Was this translation helpful? Give feedback.
All reactions