GitHub Dashboard

2025-03-04 12:11:28 UTC

Repo	Stars	Subscribers	Issues	Forks	Status	Commit
theislab/single-cell-best-practices	854	19	74	201		3a10f0
theislab/single-cell-best-practices	854	19	74	201		<a href=“https://github.com/theislab/single-cell-best-practices/commit/8dc12b211c0ca4d7a87d3def16f9cd2d8ee60310” title=“Changes to the 2. chapter:”Single-cell RNA sequencing”! (#329)“>8dc12b
theislab/scvelo	430	13	63	105		22b6e7
theislab/scvelo	430	13	63	105		f89590
theislab/cellrank	370	9	19	48		75c6c9
theislab/cellrank	370	9	19	48		b5e993
theislab/scib	334	13	40	66		023c4e
theislab/ehrapy	272	5	44	22		3cd860
theislab/ehrapy	272	5	44	22		4c4db5
theislab/moscot	136	4	40	9		46e8f6
theislab/sfaira	136	8	167	11		55bcbb
theislab/anndata2ri	132	7	13	18		42655d
theislab/scib-pipeline	68	6	16	29		e97631
theislab/graphcompass	35	2	1	1		7c4551
theislab/regvelo	35	2	0	1		619e02
theislab/regvelo	35	2	0	1		a98518
theislab/spapros	33	3	12	7		1ec08e
theislab/spapros	33	3	12	7		2f6c1a
theislab/mubind	28	3	29	0		3f62f8
theislab/hadge	24	3	15	7		1ed105
theislab/multimil	23	4	7	3		c721ba
theislab/geome	16	3	3	4		402a0a
theislab/scanpydoc	12	6	2	6		3b5b7b
theislab/cellrank2_reproducibility	9	1	2	2		8020e7
theislab/moscot_notebooks	8	1	8	4		de5900
theislab/ehrapy-datasets	7	2	0	2		e441a5
theislab/spapros-pipeline	7	2	0	0		fe84cf
theislab/regvelo_reproducibility	4	0	0	0		56512e
theislab/gh-dashboard	3	2	0	0		9feed8
theislab/devVI	0	1	0	0		f836ba
theislab/idtrack	0	1	6	0		ec9e9f

Repos without Github Actions

Repo	Stars	Subscribers	Issues	Forks
theislab/single-cell-tutorial	1448	30	21	471
theislab/scarches	352	12	56	53
theislab/single-cell-transformer-papers	300	13	41	38
theislab/scgen	283	9	28	57
theislab/dca	254	11	32	70
theislab/paga	211	10	24	33
theislab/diffxpy	196	7	108	23
theislab/kBET	160	8	9	23
theislab/zellkonverter	159	5	15	28
theislab/scCODA	156	9	5	24
theislab/sc-pert	149	5	6	14
theislab/chemCPA	108	4	7	25
theislab/ncem	105	6	29	13
theislab/cpa	95	5	21	16
theislab/destiny	82	5	31	11
theislab/nicheformer	82	5	17	4
theislab/AutoGeneS	59	6	6	8
theislab/scib-reproducibility	58	6	4	16
theislab/scTab	57	4	3	9
theislab/trVAE	56	6	3	12
theislab/spatial_scog_workshop_2022	52	9	0	26
theislab/pseudodynamics	40	7	0	6
theislab/DRVI	38	1	4	3
theislab/tcellmatch	38	9	3	7
theislab/scvelo_notebooks	34	2	5	13
theislab/scArches-reproducibility	33	4	5	0
theislab/deepflow	31	5	1	14
theislab/DeepRT	30	2	11	10
theislab/neural_organoid_atlas	29	6	3	4
theislab/prophet	29	4	0	2
theislab/batchglm	27	3	47	10
theislab/graph_abstraction	26	8	0	10
theislab/Covid_meta_analysis	24	8	2	11
theislab/scgen-reproducibility	24	4	7	9
theislab/interactive_plotting	21	4	11	7
theislab/multigrate	20	2	6	6
theislab/campa	15	4	6	5
theislab/cellrank_reproducibility	14	2	1	8
theislab/DeepCollisionalCrossSection	14	5	1	6
theislab/greatpy	14	3	4	0
theislab/inVAE	14	3	0	2
theislab/multicpa	14	2	1	2
theislab/scPoli_reproduce	14	3	2	4
theislab/scanpy-in-R	13	3	1	0
theislab/GWAS-scRNAseq-Integration	12	5	0	12
theislab/IMPA	12	2	0	1
theislab/moscot-framework_reproducibility	12	2	1	4
theislab/moslin	12	1	0	1
theislab/ncem_tutorials	12	4	6	0
theislab/ssl_in_scg	12	1	1	2
theislab/cross_system_integration	11	2	11	2
theislab/MetaMap	11	7	0	8
theislab/cpa-reproducibility	10	2	1	2
theislab/diffxpy_tutorials	10	8	4	2
theislab/gastrulation_analysis	10	4	0	1
theislab/scAnalysisTutorial	10	3	0	3
theislab/superexacttestpy	10	2	3	0
theislab/ehrapy-tutorials	9	3	0	2
theislab/enrichment_analysis_celltype	9	5	0	4
theislab/expiMap_reproducibility	9	5	3	4
theislab/PathReg	9	3	0	0
theislab/scatac_poisson_reproducibility	9	3	0	0
theislab/trvaep	9	3	0	6
theislab/2018_Angelidis	8	4	0	6
theislab/2020_Mayr	8	6	0	8
theislab/jump-cpg0016-segmentation	8	1	0	0
theislab/mouse_cross-condition_pancreatic_islet_atlas	8	2	0	4
theislab/ncem_benchmarks	8	4	4	2
theislab/sc-best-practices-ce	8	8	2	3
theislab/scachepy	8	5	3	1
theislab/scCODA_reproducibility	8	5	0	1
theislab/squidpy_reproducibility	8	2	0	7
theislab/tissue_tensorflow	8	3	0	0
theislab/2019_Strunz	7	5	1	11
theislab/pancreatic-endocrinogenesis	7	3	0	7
theislab/cellrank_notebooks	6	4	1	5
theislab/CFGen	6	1	0	4
theislab/disent	6	3	0	0
theislab/intercode	6	3	1	1
theislab/multimil_reproducibility	6	3	4	1
theislab/sfaira_tutorials	6	4	4	2
theislab/theislab.github.io	6	2	9	0
theislab/trVAE_reproducibility	6	3	2	7
theislab/atlas-feature-selection-benchmark	5	2	0	0
theislab/ehrdata	5	2	21	1
theislab/flowVI	5	3	0	0
theislab/InterpretableAutoencoders	5	4	0	0
theislab/kbranches	5	7	0	0
theislab/scanpy-demo-czbiohub	5	5	0	5
theislab/singlecell_proteomics	5	5	6	3
theislab/spatial_atlas_ssl	5	2	0	0
theislab/2022_Tritschler_pancreas_cross_species	4	3	0	1
theislab/archmap	4	2	3	0
theislab/cell_flow_perturbation	4	0	44	1
theislab/covid-perturbation	4	3	0	0
theislab/feature-attribution-sc	4	2	8	1
theislab/LODE	4	2	9	0
theislab/moscot_benchmarks	4	2	1	1
theislab/perturbation-metrics	4	2	1	0
theislab/sc_mae	4	1	0	0
theislab/task-dge-perturbation-prediction-analysis	4	2	1	1
theislab/cellrank_reproducibility_preprint	3	2	0	0
theislab/DRVI_reproducibility	3	3	0	1
theislab/ehrapy-reproducibility	3	1	1	0
theislab/extended-single-cell-best-practices-container	3	4	2	1
theislab/moscot_not	3	2	8	1
theislab/multigrate_reproducibility	3	1	0	0
theislab/multires-consensus-clustering	3	4	9	0
theislab/nbconvertR	3	3	1	2
theislab/pertpy-reproducibility	3	2	0	1
theislab/scPoli_legacy	3	5	0	0
theislab/sc_analysis_template	3	3	0	0
theislab/svaeligr	3	3	0	0
theislab/txsim	3	2	40	1
theislab/2020_iPS_Lung_Differentiation	2	5	0	2
theislab/2021_Aliluev_Tritschler_gut_HFD	2	4	0	1
theislab/bartseq-pipeline	2	4	0	3
theislab/campa_ana	2	4	0	0
theislab/covid_macrophages_integration	2	5	0	5
theislab/epicardiods_analysis	2	2	1	0
theislab/flexible_priors	2	2	0	0
theislab/gut_lineage	2	3	0	3
theislab/HPA_reproducibility	2	3	0	1
theislab/HRCA-reproducibility	2	4	0	1
theislab/interaction-tools	2	4	0	0
theislab/LineagePulse	2	5	0	0
theislab/LungInjuryRegeneration	2	8	0	0
theislab/masterpraktikum_ssl_segmentation	2	3	0	2
theislab/scanpy_squidpy_demo_2021	2	4	0	1
theislab/tissue	2	3	0	0
theislab/2021_PRMT7_regulates_Monocyte_Extravasation	1	4	0	2
theislab/archmap_data	1	0	2	0
theislab/astrocytes_reprogramming_analysis	1	5	0	0
theislab/augurpy	1	2	10	0
theislab/autoencoderPS	1	3	0	2
theislab/bartSeq	1	5	1	5
theislab/bindome	1	3	5	1
theislab/countae	1	4	0	0
theislab/ehrapy-cli	1	3	0	0
theislab/ehrapy-site	1	2	0	0
theislab/ifcseq	1	3	0	1
theislab/MS_mv_modelling	1	2	0	1
theislab/spapros_reproducibility	1	1	0	1
theislab/spatialdata-db	1	1	27	0
theislab/tardis	1	1	1	2
theislab/tissue_reproducibility	1	3	0	0
theislab/transcription_factor_activity	1	1	5	1
theislab/unbalanced_monge_maps_single_cell	1	1	0	0
theislab/zebrafish_bipolarity	1	4	0	1
theislab/2015-grn-inference	0	2	0	0
theislab/2020_Inhibition_LTbetaR-signalling	0	4	0	3
theislab/2022_Bakhti_pancreas_Syt13	0	3	0	0
theislab/archmap_admin	0	2	0	0
theislab/archmap_doc	0	3	0	0
theislab/collideseq_reproducibility	0	2	0	0
theislab/consensus-clustering-evaluation	0	4	0	0
theislab/dali	0	7	0	1
theislab/deconvATAC	0	1	1	0
theislab/edgepy	0	3	0	0
theislab/ELS_analysis	0	2	0	0
theislab/GoBI_single_cell	0	3	0	0
theislab/hadge-reproducibility	0	2	0	0
theislab/icml_cbw_2022_clcvae	0	3	0	0
theislab/integraph	0	2	4	0
theislab/inVAE_reproducibility	0	2	0	0
theislab/ipsc_ipd_analysis	0	3	0	0
theislab/LungAgingAtlas	0	5	0	0
theislab/MetaMap-web	0	4	2	0
theislab/mubind-benchmark	0	2	19	0
theislab/multicpa-reproducibility	0	2	0	0
theislab/organoid_dexamethasone_stimulation	0	3	0	1
theislab/pancreas-targeted_pharmacology	0	6	1	2
theislab/pdac_analysis	0	2	0	0
theislab/prophet-reproducibility	0	3	0	0
theislab/reproducability_AutoGeneS	0	3	0	0
theislab/reproducibility_AutoGeneS	0	3	0	0
theislab/scanpy.org	0	7	1	0
theislab/scanpy_neighbors	0	3	0	1
theislab/scarches_notebooks	0	3	0	0
theislab/scProtVelo	0	1	0	0
theislab/sc_ketamine_analysis	0	4	0	0
theislab/sfaira-portal	0	4	2	0
theislab/sfaira-site	0	4	0	0
theislab/sfaira_benchmarks	0	3	0	0
theislab/sfaira_extension	0	3	1	0
theislab/spapros-smk	0	2	0	1
theislab/spatialdata-db-submission	0	2	0	0