Merge pull request #270 from snlab-ch/develop

v1.0.0

.github/pull_request_template.md

@@ -2,19 +2,18 @@
 
 # Checklist:
 
+- Documentation
+  - [ ] Any longer functions are commented inline so that it is easier to debug in the future
+  - [ ] Any new or modified functions or data have roxygen style documentation in their .R scripts
+  - [ ] DESCRIPTION file version is bumped by the appropriate increment (major, minor, patch)
 - PR form
-  - [ ] This pull request has an informative title
-  - [ ] Description above itemizes changes under subtitles, e.g. "## Data""
-  - [ ] Any closed, fixed, or related issues are referenced and explained in the description above, e.g. "Fixed #0 by adding A"
-  - [ ] Package builds on my OS without issues
+  - [ ] Title indicates expected version number
+  - [ ] PR description above and the NEWS.md file are aligned
+  - [ ] Any closed, fixed, or related issues are referenced and described, e.g. "Fixed #0 by adding A"
 - PR checks all pass for latest commit
+  - [ ] Package builds on my OS without issues
   - [ ] CodeFactor check: Package improves or maintains good style
   - [ ] Package builds on Mac
   - [ ] Package builds on Windows
   - [ ] Package builds on Linux
   - [ ] CodeCov check: Package improves or maintains good test coverage
-- Documentation
-  - [ ] Any new or modified functions or data have roxygen style documentation in their .R scripts
-  - [ ] Any longer functions are commented inline so that it is easier to debug in the future
-  - [ ] PR description above and the NEWS.md file are aligned
-  - [ ] DESCRIPTION file version is bumped by the appropriate increment (major, minor, patch)

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: migraph
-Title: Tools for Multimodal Network Analysis
-Version: 0.13.2
-Date: 2022-12-20
+Title: Multimodal Network Analysis and More
+Version: 1.0.0
+Date: 2023-06-13
 Description: A set of tools for analysing multimodal networks.
    All functions operate with matrices, edge lists, 
    and 'igraph', 'network', and 'tidygraph' objects,
@@ -14,25 +14,22 @@ Description: A set of tools for analysing multimodal networks.
    and includes various datasets used in the book in addition to other network data.
 URL: https://github.com/snlab-ch/migraph
 BugReports: https://github.com/snlab-ch/migraph/issues
-Depends: R (>= 3.6.0)
 License: MIT + file LICENSE
 Language: en-GB
 Encoding: UTF-8
 LazyData: true
-RoxygenNote: 7.2.2
+RoxygenNote: 7.2.3
+Depends:
+    R (>= 3.6.0),
+    manynet
 Imports: 
-    BiocManager,
-    dplyr,
+    dplyr (>= 1.1.0),
     generics,
-    ggforce,
     ggplot2,
-    ggraph,
     igraph,
-    methods,
     network,
     future,
     furrr,
-    patchwork,
     pillar,
     purrr,
     rlang,
@@ -43,13 +40,8 @@ Suggests:
     concaveman,
     covr,
     ggdendro,
-    knitr,
     minMSE,
     oaqc,
-    readxl,
-    Rgraphviz,
-    RSiena,
-    rmarkdown,
     roxygen2,
     rsconnect,
     testthat,
@@ -60,6 +52,10 @@ Authors@R:
              role = c("cre", "aut", "ctb"),
              email = "james.hollway@graduateinstitute.ch",
              comment = c("IHEID", ORCID = "0000-0002-8361-9647")),
+      person(given = "Henrique",
+             family = "Sposito",
+             role = "ctb",
+             comment = c("IHEID", ORCID = "0000-0003-3420-6085")),
       person(given = "Jael",
              family = "Tan",
              role = "ctb",
@@ -69,11 +65,6 @@ Authors@R:
            family = "Bieri",
            role = c("ctb"),
            email = "bernhard.bieri@graduateinstitute.ch",
-           comment = c(ORCID = "0000-0001-5943-9059")),
-      person(given = "Henrique",
-             family = "Sposito",
-             role = "ctb",
-             comment = c("IHEID", ORCID = "0000-0003-3420-6085"))
+           comment = c(ORCID = "0000-0001-5943-9059"))
     )
 Roxygen: list(markdown = TRUE, roclets = c("namespace", "rd"))
-VignetteBuilder: knitr

LICENSE

@@ -1,2 +1,2 @@
-YEAR: 2020
+YEAR: 2021
 COPYRIGHT HOLDER: James Hollway