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@PapenfussLab @tidytranscriptomics-workshops

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  1. CuratedAtlasQueryR CuratedAtlasQueryR Public

    Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.

    R 89 7

  2. MangiolaLaboratory/sccomp MangiolaLaboratory/sccomp Public

    Testing differences in cell type proportions from single-cell data.

    R 94 7

  3. tidyHeatmap tidyHeatmap Public

    Draw heatmap simply using a tidy data frame

    R 325 23

  4. tidyseurat tidyseurat Public

    Seurat meets tidyverse. The best of both worlds.

    R 159 12

  5. tidybulk tidybulk Public template

    Brings bulk and pseudobulk transcriptomics to the tidyverse

    R 166 25

  6. tidySingleCellExperiment tidySingleCellExperiment Public

    Brings SingleCellExperiment objects to the tidyverse

    R 36 10