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Makefile
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CC=h5cc
ifdef TRAP_FPE
DEFINES+=-DTRAP_FPE=$(TRAP_FPE)
CFLAGS+= -fsignaling-nans -ftrapping-math
endif
ifdef NSIMD
DEFINES+=-DNSIMD=$(NSIMD)
endif
ifdef TARGET
DEFINES+=-DTARGET=$(TARGET)
endif
ifdef VERBOSE
DEFINES+=-DVERBOSE=$(VERBOSE)
else
DEFINES+=-DVERBOSE=1
endif
ifeq ($(SINGLEPRECISION),1)
DEFINES+=-DSINGLEPRECISION
endif
ifeq ($(MPI),1)
DEFINES+=-DMPI
CC=h5pcc
endif
ifeq ($(RANDOM),MKL)
DEFINES+=-DRANDOM_MKL
CFLAGS+=-mkl
ifdef RANDOM_MKL_RNG
DEFINES+=-DRANDOM_MKL_RNG=$(RANDOM_MKL_RNG)
endif
else ifeq ($(RANDOM),GSL)
DEFINES+=-DRANDOM_GSL
CFLAGS+=-lgsl -lgslcblas
else ifeq ($(RANDOM),LCG)
DEFINES+=-DRANDOM_LCG
endif
ifneq ($(CC),h5cc)
ifneq ($(CC),h5pcc)
CFLAGS+=-lhdf5 -lhdf5_hl
endif
endif
CFLAGS+=-O2 -lm -Wall -fopenmp -fPIC -std=c11 $(DEFINES) $(FLAGS)
# Write CFLAGS and CC to a file to be included into output
$(shell echo "#define CFLAGS " $(CFLAGS) > compiler_flags.h)
$(shell echo "#define CC " $(CC) >> compiler_flags.h)
SIMDIR = simulate/
SIMHEADERS = $(wildcard $(SIMDIR)simulate*.h $(SIMDIR)atomic.h)
SIMOBJS = $(patsubst %.c,%.o,$(wildcard $(SIMDIR)simulate*.c) $(SIMDIR)atomic.c)
STEPDIR = $(SIMDIR)step/
STEPHEADERS = $(wildcard $(STEPDIR)step*.h)
STEPOBJS = $(patsubst %.c,%.o,$(wildcard $(STEPDIR)step*.c))
MCCCDIR = $(SIMDIR)mccc/
MCCCHEADERS = $(wildcard $(MCCCDIR)mccc*.h)
MCCCOBJS = $(patsubst %.c,%.o,$(wildcard $(MCCCDIR)mccc*.c))
DIAGDIR = diag/
DIAGHEADERS = $(wildcard $(DIAGDIR)diag*.h $(DIAGDIR)dist*.h)
DIAGOBJS = $(patsubst %.c,%.o,$(wildcard $(DIAGDIR)diag*.c $(DIAGDIR)dist*.c))
BFDIR = Bfield/
BFHEADERS = $(wildcard $(BFDIR)B_*.h)
BFOBJS = $(patsubst %.c,%.o,$(wildcard $(BFDIR)B_*.c))
EFDIR = Efield/
EFHEADERS = $(wildcard $(EFDIR)E_*.h)
EFOBJS = $(patsubst %.c,%.o,$(wildcard $(EFDIR)E_*.c))
PLSDIR = plasma/
PLSHEADERS = $(wildcard $(PLSDIR)plasma_*.h)
PLSOBJS = $(patsubst %.c,%.o,$(wildcard $(PLSDIR)plasma_*.c))
WALLDIR = wall/
WALLHEADERS = $(wildcard $(WALLDIR)wall_*.h)
WALLOBJS = $(patsubst %.c,%.o,$(wildcard $(WALLDIR)wall_*.c))
HDF5IODIR = hdf5io/
HDF5IOHEADERS = $(wildcard $(HDF5IODIR)hdf5*.h)
HDF5IOOBJS = $(patsubst %.c,%.o,$(wildcard $(HDF5IODIR)hdf5*.c))
N0DIR = neutral/
N0HEADERS = $(wildcard $(N0DIR)N0_*.h)
N0OBJS = $(patsubst %.c,%.o,$(wildcard $(N0DIR)N0_*.c))
MHDDIR = mhd/
MHDHEADERS = $(wildcard $(MHDDIR)mhd_*.h)
MHDOBJS = $(patsubst %.c,%.o,$(wildcard $(MHDDIR)mhd_*.c))
ASIGMADIR = asigma/
ASIGMAHEADERS = $(wildcard $(ASIGMADIR)asigma_*.h)
ASIGMAOBJS = $(patsubst %.c,%.o,$(wildcard $(ASIGMADIR)asigma_*.c))
LINTDIR = linint/
LINTHEADERS = $(wildcard $(LINTDIR)linint*.h)
LINTOBJS = $(patsubst %.c,%.o,$(wildcard $(LINTDIR)linint*.c))
SPLINEDIR = spline/
SPLINEHEADERS = $(wildcard $(SPLINEDIR)spline.h $(SPLINEDIR)interp.h)
SPLINEOBJS = $(patsubst %.c,%.o,$(wildcard $(SPLINEDIR)spline*.c \
$(SPLINEDIR)interp*.c))
UTESTDIR = unit_tests/
DOCDIR = doc/
HEADERS=ascot5.h math.h consts.h list.h octree.h physlib.h error.h \
$(DIAGHEADERS) $(BFHEADERS) $(EFHEADERS) $(WALLHEADERS) \
$(MCCCHEADERS) $(STEPHEADERS) $(SIMHEADERS) $(HDF5IOHEADERS) \
$(PLSHEADERS) $(N0HEADERS) $(MHDHEADERS) $(ASIGMAHEADERS) \
$(LINTHEADERS) $(SPLINEHEADERS) \
neutral.h plasma.h particle.h endcond.h B_field.h gctransform.h \
E_field.h wall.h simulate.h diag.h offload.h boozer.h mhd.h \
random.h print.h hdf5_interface.h suzuki.h nbi.h biosaw.h \
asigma.h boschhale.h mpi_interface.h libascot_mem.h
OBJS= math.o list.o octree.o error.c \
$(DIAGOBJS) $(BFOBJS) $(EFOBJS) $(WALLOBJS) \
$(MCCCOBJS) $(STEPOBJS) $(SIMOBJS) $(HDF5IOOBJS) \
$(PLSOBJS) $(N0OBJS) $(MHDOBJS) $(ASIGMAOBJS) $(LINTOBJS) \
$(SPLINEOBJS) \
neutral.o plasma.o particle.o endcond.o B_field.o gctransform.o \
E_field.o wall.o simulate.o diag.o offload.o boozer.o mhd.o \
random.o print.c hdf5_interface.o suzuki.o nbi.o biosaw.o \
asigma.o mpi_interface.o boschhale.o
BINS=test_math test_nbi test_bsearch \
test_wall_2d test_plasma test_random \
test_wall_3d test_B test_offload test_E \
test_interp1Dcomp test_linint3D test_N0 test_N0_1D \
test_spline ascot5_main bbnbi5 test_diag_orb test_asigma \
test_afsi
ifdef NOGIT
DUMMY_GIT_INFO := $(shell touch gitver.h)
else
GET_GIT_INFO := $(shell bash gitver.sh)
endif
all: $(BINS)
libascot: libascot.so
true
libascot.so: CFLAGS+=-fPIC -shared
ifeq ($(CC),h5cc)
libascot.so: CFLAGS+=-shlib
endif
ifeq ($(CC),h5pcc)
libascot.so: CFLAGS+=-shlib
endif
libascot.so: libascot.o ascot5_main.o libascot_mem.o afsi.o $(OBJS)
$(CC) $(CFLAGS) -o $@ $^
ascot5_main: ascot5_main.o $(OBJS)
$(CC) -o $@ $^ $(CFLAGS)
bbnbi5: bbnbi5.o $(OBJS)
$(CC) -o $@ $^ $(CFLAGS)
doc:
doxygen Doxyfile
test_B: $(UTESTDIR)test_B.o $(OBJS)
$(CC) -o $@ $^ $(CFLAGS)
test_diag_orb: $(UTESTDIR)test_diag_orb.o $(OBJS)
$(CC) -o $@ $^ $(CFLAGS)
test_wall_3d: $(UTESTDIR)test_wall_3d.o $(OBJS)
$(CC) -o $@ $^ $(CFLAGS)
test_math: $(UTESTDIR)test_math.o $(OBJS)
$(CC) -o $@ $^ $(CFLAGS)
test_wall_2d: $(UTESTDIR)test_wall_2d.o $(OBJS)
$(CC) -o $@ $^ $(CFLAGS)
test_offload: $(UTESTDIR)test_offload.o
$(CC) -o $@ $^ $(CFLAGS)
test_E: $(UTESTDIR)test_E.o $(OBJS)
$(CC) -o $@ $^ $(CFLAGS)
test_interp1Dcomp: $(UTESTDIR)test_interp1Dcomp.o $(OBJS)
$(CC) -o $@ $^ $(CFLAGS)
test_plasma: $(UTESTDIR)test_plasma.o $(OBJS)
$(CC) -o $@ $^ $(CFLAGS)
test_random: $(UTESTDIR)test_random.o $(OBJS)
$(CC) -o $@ $^ $(CFLAGS)
test_linint3D: $(UTESTDIR)test_linint3D.o $(OBJS)
$(CC) -o $@ $^ $(CFLAGS)
test_N0: $(UTESTDIR)test_N0.o $(OBJS)
$(CC) -o $@ $^ $(CFLAGS)
test_bsearch: $(UTESTDIR)test_bsearch.o $(OBJS)
$(CC) -o $@ $^ $(CFLAGS)
test_afsi: $(UTESTDIR)test_afsi.o $(OBJS)
$(CC) -o $@ $^ $(CFLAGS)
test_nbi: $(UTESTDIR)test_nbi.o $(OBJS)
$(CC) -o $@ $^ $(CFLAGS)
test_spline: $(UTESTDIR)test_spline.o $(OBJS)
$(CC) -o $@ $^ $(CFLAGS)
test_asigma: $(UTESTDIR)test_asigma.o $(OBJS)
$(CC) -o $@ $^ $(CFLAGS)
%.o: %.c $(HEADERS) Makefile
$(CC) -c -o $@ $< $(CFLAGS)
ASCOTPY2_HEADERFILES=particle.h hdf5_interface.h ascot5.h mpi_interface.h \
simulate.h ascot5_main.h offload.h diag.h libascot_mem.h \
wall.h Bfield/B_STS.h B_field.h endcond.h diag/diag_orb.h \
hdf5io/hdf5_wall.h hdf5io/hdf5_bfield.h afsi.h
ascotpy2.py : libascot.so
clang2py -l libascot.so -o $@ \
$(ASCOTPY2_HEADERFILES) \
--clang-args="-I/usr/include/hdf5/serial"
# The above hdf5-include folder should not be hardcoded...
clean:
@rm -f *.o *.so *.test *.optrpt $(BINS) $(SIMDIR)*.o $(STEPDIR)*.o \
$(MCCCDIR)*.o $(HDF5IODIR)*.o $(PLSDIR)*.o $(DIAGDIR)*.o \
$(BFDIR)*.o $(EFDIR)*.o $(WALLDIR)*.o $(MHDDIR)*.o \
$(N0DIR)*.o $(ASIGMADIR)*.o $(LINTDIR)*.o $(SPLINEDIR)*.o \
$(UTESTDIR)*.o *.pyc
@rm -rf $(DOCDIR)
@rm -f gitver.h