gwas catalogue 2024-11-03

.bumpversion.toml

@@ -0,0 +1,35 @@
+[tool.bumpversion]
+current_version = "1.3.2"
+search = "{current_version}"
+replace = "{new_version}"
+message = "Bump version: {current_version} → {new_version}"
+regex = false
+ignore_missing_version = false
+ignore_missing_files = false
+commit = true
+parse = """(?x)
+    (?P<major>0|[1-9]\\d*)\\.
+    (?P<minor>0|[1-9]\\d*)\\.
+    (?P<patch>0|[1-9]\\d*)
+    (?:\\.(?P<dev>\\d+))?
+"""
+
+serialize = [
+    "{major}.{minor}.{patch}.{dev}",
+    "{major}.{minor}.{patch}",
+]
+
+[[tool.bumpversion.files]]
+filename = "DESCRIPTION"
+search = "Version: {current_version}"
+replace = "Version: {new_version}"
+
+[[tool.bumpversion.files]]
+filename = "inst/CITATION"
+search = "{current_version}"
+replace = "{new_version}"
+
+[[tool.bumpversion.files]]
+filename = ".github/workflows/pkgdown.yaml"
+search = "VERSION: '{current_version}'"
+replace = "VERSION: '{new_version}'"

data-raw/data-raw.R

@@ -6,8 +6,8 @@ source("data-raw/gwas_utils.R")
 
 options(timeout = 500000)
 
-catalog_version_date <- '2024-09-22'
-ebi_catalog_version_date <- '20240922'
+catalog_version_date <- '2024-11-03'
+ebi_catalog_version_date <- '20241103'
 fname_catalog_associations <- 
   file.path(
     "data-raw",