forked from deeptools/pyGenomeTracks
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathbigwig.ini
77 lines (65 loc) · 1.29 KB
/
bigwig.ini
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
[test bigwig lines]
file = bigwig2_X_2.5e6_3.5e6.bw
color = gray
height = 2
type = line
title = orientation=inverted; show data range=no
orientation = inverted
show data range = no
max_value = 50
[test bigwig lines:0.2]
file = bigwig_chrx_2e6_5e6.bw
color = red
height = 2
type = line:0.2
title = type=line:0.2
[spacer]
[test bigwig points]
file = bigwig_chrx_2e6_5e6.bw
color = black
height = 2
min_value = 0
max_value = 100
type = points:0.5
title = type=point:0.5; min_value=0;max_value=100
[spacer]
[test bigwig nans to zeros]
file = bigwig_chrx_2e6_5e6.bw
color = red
height = 2
nans to zeros = True
title = nans to zeros =True
[spacer]
[test bigwig mean]
file = bigwig2_X_2.5e6_3.5e6.bw
color = gray
height = 5
title = gray:summary method=mean; blue:summary method=max; red:summary method=min
type = line
summary method = mean
max_value = 150
min_value = -5
show data range = no
number of bins = 300
[test bigwig max]
file = bigwig2_X_2.5e6_3.5e6.bw
#title = test
color = blue
type = line
summary method = max
max_value = 150
min_value = -15
show data range = no
overlay previous = share-y
number of bins = 300
[test bigwig min]
file = bigwig2_X_2.5e6_3.5e6.bw
color = red
type=line
summary method = min
max_value = 150
min_value = -25
overlay previous = share-y
number of bins = 300
[spacer]
[x-axis]