issues Search Results · repo:shenwei356/unikmer language:Go
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inshenwei356/unikmer (press backspace or delete to remove)现在在 ARM 处理器上的 Conda 还无法通过 conda install -c bioconda unikmer 安装。原因可能是还没有在 Conda 中设置 osx-arm64 的支持。看了一下
https://github.com/shenwei356/unikmer/releases/tag/v0.20.0 ,软件平台式支持的。希望添加一下 macOS 版本。
gaospecial
- Opened on Nov 11, 2024
- #31
I have a fasta file containing multiple sequences, and want to generate kmers for each of the sequences separately. Does
unikmer has such a function?
gaospecial
- Opened on Nov 15, 2023
- #30
Many unikmer commands output gzipped files. But uniqs/map don t. Could you enable the --compact flag for this command to
output gzipped output?
gaospecial
- Opened on Nov 13, 2023
- #29
Amazing tool! Exactly what I was looking for, and performing smoothly. (Is the tool published -I could not find much
online?)
I am using unikmer as outlined in this workflow: https://www.biostars.org/p/475263/ ...
sihellem
- Opened on Nov 11, 2023
- #28
Hi,
I have 5 genome sequences. I was to find regions common among the four but either present is very dissimilar to the 5th
one. Is there any way to do it?
Thanks
sanjaysingh765
- Opened on Apr 12, 2023
- #27
- [x] a table summaring information/requirement of input/output files
- sorted
- flag consistency
- [x] count: add more information, suggestion.
doc
shenwei356
- Opened on Apr 9, 2022
- #25
I have split this package into several repositories:
- kmers, a package of kmer (sketch) related operations.
- unik provides k-mer serialization methods for the package.
- bio/sketches provides ...
shenwei356
- Opened on Nov 8, 2021
- #24
Hi,
Very cool tool, and in go-lang! I would suggest adding some instructions on how to use hash-based mer operations. For
example when specifying minimizers, syncmers, or k 32 (I think), one needs to ...
jelber2
- 4
- Opened on Aug 10, 2021
- #23
Hi, Thanks a lot for your work on unikmer.
At the moment, it works great for 64 bit architectures, but seems to fail on 32-bit ones -- reason being 1 32 - 1
directly being used here which results in a: ...
nileshpatra
- 1
- Opened on Feb 28, 2021
- #21
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