Fix config file

sequana · Feb 10, 2022 · 6b5c2f5 · 6b5c2f5
1 parent 517863a
commit 6b5c2f5
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Showing 3 changed files with 5 additions and 4 deletions.
diff --git a/README.rst b/README.rst
@@ -102,6 +102,7 @@ Changelog
 ========= ====================================================================
 Version   Description
 ========= ====================================================================
+0.11.1    * Fix config file (removing hard-coded path)
 0.11.0    * Fix multiqc plot using same fix as in sequna_rnaseq pipelines
           * add utility plot to check rate of  ribosomal per sequence and also
             the corresponding  RPKM.

diff --git a/sequana_pipelines/ribofinder/config.yaml b/sequana_pipelines/ribofinder/config.yaml
@@ -7,7 +7,7 @@
 # If input_directory provided, use it otherwise if input_pattern provided,
 # use it, otherwise use input_samples.
 # ============================================================================
-input_directory: /home/cokelaer/Work/github/sequana_pipelines/ribofinder/test/data
+input_directory:
 input_readtag: _R[12]_
 input_pattern: '*fastq.gz'
 # =========================================== Sections for the users
@@ -37,8 +37,8 @@ general:
     rRNA_file: ''
     rRNA_feature: rRNA
     genbank_file: ''
-    gff_file: /home/cokelaer/Work/github/sequana_pipelines/ribofinder/test/data/Lepto.gff
-    reference_file: /home/cokelaer/Work/github/sequana_pipelines/ribofinder/test/data/Lepto.fa
+    gff_file: 
+    reference_file: 
 
 
 

diff --git a/setup.py b/setup.py
@@ -7,7 +7,7 @@
 
 _MAJOR               = 0
 _MINOR               = 11
-_MICRO               = 0
+_MICRO               = 1
 version              = '%d.%d.%d' % (_MAJOR, _MINOR, _MICRO)
 release              = '%d.%d' % (_MAJOR, _MINOR)