ibis 0.6 compat

scverse · Sep 20, 2023 · 1787503 · 1787503
1 parent ecd3bc0
commit 1787503
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Showing 2 changed files with 3 additions and 2 deletions.
diff --git a/pyproject.toml b/pyproject.toml
@@ -23,7 +23,7 @@ urls.Documentation = "https://genomic-features.readthedocs.io/"
 urls.Source = "https://github.com/scverse/genomic-features"
 urls.Home-page = "https://github.com/scverse/genomic-features"
 dependencies = [
-    "ibis-framework[sqlite]",
+    "ibis-framework[sqlite]>0.6",
     "pooch",
     "pandas",
     "pyarrow",

diff --git a/src/genomic_features/ensembl/ensembldb.py b/src/genomic_features/ensembl/ensembldb.py
@@ -345,7 +345,8 @@ def _join_query(
                     t2,
                     predicates=[key],
                     how="left",
-                    suffixes=("", "_y"),
+                    rname="{name}_y",
+                    # suffixes=("", "_y"),
                 )
                 query = query.drop(f"{key}_y")  # drop duplicate columns
             else: