Merge pull request #129 from rsetienne/develop

v3.2.1 - Documentation bugfix
rsetienne · Mar 24, 2021 · 6da0e3f · 6da0e3f
2 parents 64a9769 + 5339132
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,7 +1,7 @@
 Package: DAISIE
 Type: Package
 Title: Dynamical Assembly of Islands by Speciation, Immigration and Extinction
-Version: 3.2.0
+Version: 3.2.1
 Date: 2021-03-23
 Depends: R (>= 3.5.0)
 biocViews:

diff --git a/NEWS.md b/NEWS.md
@@ -1,3 +1,9 @@
+# DAISIE 3.2.1
+
+**N.B.: MacOS users may experience issues when installing DAISIE, especially when on MacOS Big Sur. If that is you case, please see [here](doc/DAISIE_macOS.md) for detailed installation instructions.**
+
+* Minor documentation improvements.
+
 # DAISIE 3.2.0
 
 **N.B.: MacOS users may experience issues when installing DAISIE, especially when on MacOS Big Sur. If that is you case, please see [here](doc/DAISIE_macOS.md) for detailed installation instructions.**

diff --git a/R/DAISIE-package.R b/R/DAISIE-package.R
@@ -11,7 +11,8 @@
 #' \item Valente, L., Illera, J. C., Havenstein, K., Pallien, T., Etienne, R. S., & Tiedemann, R. (2017). Equilibrium Bird Species Diversity in Atlantic Islands. Current Biology 27: 1660-1666. \doi{10.1016/j.cub.2017.04.053}.\cr
 #' \item Valente, L., Phillimore, A. B., & Etienne, R. (2018). Using molecular phylogenies in island biogeography: It's about time. Ecography 41: 1684-1686. \doi{10.1111/ecog.03503}.\cr
 #' \item Valente, L., Etienne, R. S., & Garcia-R, J. C. (2019). Deep macroevolutionary impact of humans on New Zealand's unique avifauna. Current Biology 29: 2563-2569. \doi{10.1016/j.cub.2019.06.058}.\cr
-#' \item Valente, L., Phillimore, A. B., Melo, M., Warren, B. H., Clegg, S. M., Havenstein, K., Etienne, R. S. (2020). A simple dynamic model explains the diversity of island birds worldwide. Nature 579: 92-96. \doi{10.1038/s41586-020-2022-5}.\cr
+#' \item Valente, L., Phillimore, A. B., Melo, M., Warren, B. H., Clegg, S. M., Havenstein, K., & Etienne, R. S. (2020). A simple dynamic model explains the diversity of island birds worldwide. Nature 579: 92-96. \doi{10.1038/s41586-020-2022-5}.\cr
+#' \item Hauffe, T., Delicado, D., Etienne, R.S., & Valente, L. (2020). Lake expansion elevates equilibrium diversity via increasing colonization. Journal of Biogeography 47: 1849–1860. \doi{10.1111/jbi.13914}.\cr
 #' } \cr
 #' @keywords internal
 #' @import Rcpp

diff --git a/man/DAISIE-package.Rd b/man/DAISIE-package.Rd
diff --git a/man/DAISIE_loglik_integrate.Rd b/man/DAISIE_loglik_integrate.Rd
diff --git a/man/integral_peak.Rd b/man/integral_peak.Rd
diff --git a/man/transform_gamma_pars.Rd b/man/transform_gamma_pars.Rd