formatting: 🧹 -> 📦 project formatting,ruff,bandit,mypy configurations are added

[onuralpszr]

Description

• line length is 120 (added based on previous black config)
• chore: 🧹 mypy fixes added
• refactor: 🧹 -> 📦 project formatting,cleanups,import errors fixed
• feat(github): ⭐ basic python .gitattributes with extras added
• refactor: 🧹 update type hints and clean up docstrings across multiple files
• black and flake removed and replace via ruff and add as dev-dependency
• refactor: 🧹 update numpy random choice method and enhance reproducibility settings
• Documentation also reviewed and test (mkdocs serve) formatting didn't break any documentation based on visible documentation

Enabled Rules

• https://docs.astral.sh/ruff/rules/#pyupgrade-up
• https://docs.astral.sh/ruff/rules/#pyflakes-f
• https://docs.astral.sh/ruff/rules/#isort-i
• https://docs.astral.sh/ruff/rules/#error-e
• https://docs.astral.sh/ruff/rules/#flake8-builtins-a
• https://docs.astral.sh/ruff/settings/#lintflake8-quotes
• https://docs.astral.sh/ruff/rules/#warning-w
• https://docs.astral.sh/ruff/rules/#tryceratops-try
• https://docs.astral.sh/ruff/settings/#lintpep8-naming
• https://docs.astral.sh/ruff/rules/#mccabe-c90
• https://docs.astral.sh/ruff/rules/#ruff-specific-rules-ruf
• https://docs.astral.sh/ruff/rules/#numpy-specific-rules-npy

pre-commit report

trim trailing whitespace.................................................Passed
check that executables have shebangs.................(no files to check)Skipped
check toml...............................................................Passed
check for case conflicts.................................................Passed
check for added large files..............................................Passed
detect private key.......................................................Passed
pretty format json.......................................................Passed
fix end of files.........................................................Passed
mixed line ending........................................................Passed
bandit...................................................................Passed
ruff.....................................................................Passed
ruff-format..............................................................Passed
mypy.....................................................................Passed

Tox - Pytest Reports

  py39: OK (10.04=setup[6.20]+cmd[3.84] seconds)
  py310: OK (6.96=setup[3.43]+cmd[3.53] seconds)
  py311: OK (7.18=setup[3.52]+cmd[3.66] seconds)
  py312: OK (7.07=setup[3.34]+cmd[3.73] seconds)
  congratulations :) (31.31 seconds)