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Coseg - 0.2.4

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@rmhubley rmhubley released this 30 Jul 20:05
  • IUB codes in input sequences caused the code to segfault.
    Coseg will now randomly choose a nucleotide to substitute
    each time it encounters one in in the input sequence. It
    will also inform the user when doing so. Thanks to David
    Ray for reporting this and suggesting the fix.
  • Fixed the svg tag so that the files
    will directly load in HTML5 web browsers.
  • Calculation of divergence has been improved.
    We now use kimura substition distance with CpG
    site accounting modifications instead of the
    mixed substition and indel calculation.
  • Produce a warning if emutfrac is not within expected
    range, rather than crashing.