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config.yaml
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# Project definitions (do not edit)
Task: maDrosophila
scorer: RicardoDiaz
date: oct1
multianimalproject: true
# Project path (change when moving around)
project_path: /home/ricardo/Drosophila/DeepLabCut/conda-environments/maDrosophila-RicardoDiaz-2020-10-01
# Annotation data set configuration (and individual video cropping parameters)
video_sets:
/home/ricardo/Drosophila/DeepLabCut/conda-environments/maDrosophila-RicardoDiaz-2020-10-01/videos/Movie.S3_cropped.mov:
crop: 0, 400, 0, 400
individuals:
- dros1
- dros2
uniquebodyparts: []
multianimalbodyparts:
- leftwing
- rightwing
- head
- torax
- abdomen
skeleton:
- - rightwing
- head
- - leftwing
- rightwing
- - rightwing
- torax
- - rightwing
- abdomen
- - head
- torax
- - leftwing
- abdomen
- - leftwing
- torax
- - torax
- abdomen
- - leftwing
- head
bodyparts: MULTI!
start: 0
stop: 1
numframes2pick: 20
# Plotting configuration
skeleton_color: black
pcutoff: 0.6
dotsize: 12
alphavalue: 0.7
colormap: plasma
# Training,Evaluation and Analysis configuration
TrainingFraction:
- 0.95
iteration: 0
default_net_type: resnet_50
default_augmenter: multi-animal-imgaug
snapshotindex: -1
batch_size: 8
# Cropping Parameters (for analysis and outlier frame detection)
cropping: false
croppedtraining: true
#if cropping is true for analysis, then set the values here:
x1: 0
x2: 640
y1: 277
y2: 624
# Refinement configuration (parameters from annotation dataset configuration also relevant in this stage)
corner2move2:
- 50
- 50
move2corner: true
video_sets_original:
/home/ricardo/Drosophila/DeepLabCut/conda-environments/maDrosophila-RicardoDiaz-2020-10-01/videos/Movie.S3.mov:
crop: 0, 1280, 0, 720