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create parser for single gene simulation evaluation
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ashuaibi7 committed Jan 12, 2025
1 parent 5443142 commit e0273a5
Showing 1 changed file with 14 additions and 1 deletion.
15 changes: 14 additions & 1 deletion src/dialect/utils/argument_parser.py
Original file line number Diff line number Diff line change
Expand Up @@ -150,6 +150,19 @@ def add_simulate_create_parser(subparsers):
# add_simulate_crete_pair_gene_parser(simulate_create_subparsers) # TODO


def add_simulate_evaluate_single_gene_parser(subparsers):
single_gene_parser = subparsers.add_parser(
"single", help="Evaluate single gene simulations"
)
single_gene_parser.add_argument(
"-p", "--params", required=True, help="Path to the parameters file"
)
single_gene_parser.add_argument(
"-d", "--data", required=True, help="Path to the data file"
)
single_gene_parser.add_argument("-o", "--out", type=str, required=True)


def add_simulate_evaluate_parser(subparsers):
simulate_evaluate_parser = subparsers.add_parser(
"evaluate", help="Evaluate simulation data"
Expand All @@ -159,7 +172,7 @@ def add_simulate_evaluate_parser(subparsers):
required=True,
help="Available simulation types (single, pair)",
)
# add_simulate_evaluate_single_gene_parser(simulate_evaluate_subparsers) # TODO
add_simulate_evaluate_single_gene_parser(simulate_evaluate_subparsers)
# add_simulate_evaluate_pair_gene_parser(simulate_evaluate_subparsers) # TODO


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