uncomment line to run CBaSE to obtain BMRs

raphael-group · Dec 13, 2024 · 35afdd1 · 35afdd1
1 parent 1820c5c
commit 35afdd1
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/dialect/utils/generate.py b/src/dialect/utils/generate.py
@@ -181,7 +181,7 @@ def generate_bmr_and_counts(maf, out, reference):
     """
     logging.info(f"Generating BMR and count matrix for MAF file: {maf}")
     check_file_exists(maf)
-    # generate_bmr_using_CBaSE(maf, out, reference)
+    generate_bmr_using_CBaSE(maf, out, reference)
     generate_bmr_files_from_CBaSE_output(out)
     generate_counts_from_CBaSE_output(out)
     logging.info("BMR and count matrix generation completed successfully.")