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implemented optimization with scipy for interaction class CI #30: Commit 18901fa pushed by ashuaibi7
November 23, 2024 13:18 45s main
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November 23, 2024 13:18 45s
implemented rho computation method CI #29: Commit ec99e0a pushed by ashuaibi7
November 23, 2024 13:10 41s main
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November 23, 2024 13:10 41s
fixed null tau declaration in likelihood ratio test method CI #28: Commit 3f41cdf pushed by ashuaibi7
November 23, 2024 13:02 1m 27s main
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November 23, 2024 13:02 1m 27s
fixed variable typo and made log likelihood code more readable CI #27: Commit 92b4ec1 pushed by ashuaibi7
November 23, 2024 12:56 1m 35s main
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November 23, 2024 12:56 1m 35s
implemented wald statistic computation method CI #26: Commit 1aa5429 pushed by ashuaibi7
November 23, 2024 12:46 39s main
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November 23, 2024 12:46 39s
implemented log odds ratio method CI #25: Commit 9b11007 pushed by ashuaibi7
November 23, 2024 12:46 47s main
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November 23, 2024 12:46 47s
implemented log likelihood method for pairwise interactions CI #24: Commit c450795 pushed by ashuaibi7
November 23, 2024 12:21 1m 28s main
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November 23, 2024 12:21 1m 28s
initialize and template new class for interactions between genes CI #23: Commit d7cf319 pushed by ashuaibi7
November 23, 2024 12:03 40s main
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November 23, 2024 12:03 40s
fix minor spelling error CI #22: Commit 1a809cb pushed by ashuaibi7
November 23, 2024 12:03 46s main
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November 23, 2024 12:03 46s
begin identify implementation and map out remaining steps as TODO sta… CI #21: Commit e7d0b87 pushed by ashuaibi7
November 22, 2024 13:38 39s main
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November 22, 2024 13:38 39s
create template functions for EM from scratch and EM using pomegranat… CI #20: Commit 2d27a1b pushed by ashuaibi7
November 22, 2024 13:37 42s main
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November 22, 2024 13:37 42s
implemented pi parameter value estimation with optimization CI #19: Commit f183185 pushed by ashuaibi7
November 22, 2024 12:56 47s main
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November 22, 2024 12:56 47s
removed binarize counts method and contingency table method in the si… CI #18: Commit c237f29 pushed by ashuaibi7
November 22, 2024 12:33 40s main
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November 22, 2024 12:33 40s
updated log likelihood method to pass in pi and implemented likelihoo… CI #17: Commit d5ab92c pushed by ashuaibi7
November 22, 2024 12:31 39s main
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November 22, 2024 12:31 39s
simplified log odds ratio calculation cases and implementation to imp… CI #16: Commit 74d6398 pushed by ashuaibi7
November 22, 2024 12:20 41s main
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November 22, 2024 12:20 41s
implemented log likelihood ratio function for single gene and initial… CI #15: Commit 62152d0 pushed by ashuaibi7
November 21, 2024 13:50 51s main
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November 21, 2024 13:50 51s
updated function comments to align with Google docstring style and in… CI #14: Commit 9351303 pushed by ashuaibi7
November 21, 2024 13:20 38s main
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November 21, 2024 13:20 38s
created template gene class/model to instantiate and use to run DIALE… CI #13: Commit c3fac45 pushed by ashuaibi7
November 20, 2024 11:48 41s main
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November 20, 2024 11:48 41s
added template code for calling identify interactions function with D… CI #12: Commit 26b993d pushed by ashuaibi7
November 19, 2024 13:24 40s main
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November 19, 2024 13:24 40s
separate out simple helper function to check file exists for use acro… CI #11: Commit e535562 pushed by ashuaibi7
November 19, 2024 13:19 1m 11s main
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November 19, 2024 13:19 1m 11s
added new subparser for functionality with running DIALECT to identif… CI #10: Commit 56152c3 pushed by ashuaibi7
November 19, 2024 13:06 49s main
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November 19, 2024 13:06 49s
initialize empty tests folder for unit function tests and module tests CI #9: Commit c2275da pushed by ashuaibi7
November 19, 2024 12:56 40s main
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November 19, 2024 12:56 40s
updated README and added LICENSE information CI #8: Commit 7904063 pushed by ashuaibi7
November 19, 2024 12:55 41s main
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November 19, 2024 12:55 41s
simplify github command interface workflow to remove requirements ins… CI #7: Commit 146f97d pushed by ashuaibi7
November 19, 2024 12:20 41s main
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November 19, 2024 12:20 41s
added functionality to create final bmr files and count matrix with g… CI #6: Commit 578337d pushed by ashuaibi7
November 18, 2024 12:48 48s main
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November 18, 2024 12:48 48s
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