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res-89 added minor comment to test github linking functionality with … CI #80: Commit 7d11d8b pushed by ashuaibi7
December 14, 2024 14:50 39s main
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December 14, 2024 14:50 39s
added functionality to find set of overlapping samples between two ge… CI #79: Commit a469ddd pushed by ashuaibi7
December 14, 2024 14:40 46s main
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December 14, 2024 14:40 46s
modify call to gene class to include samples CI #78: Commit 50d540b pushed by ashuaibi7
December 14, 2024 14:22 38s main
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December 14, 2024 14:22 38s
add instance variable to record sample names and create section in co… CI #77: Commit 9ebb2f1 pushed by ashuaibi7
December 14, 2024 14:18 38s main
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December 14, 2024 14:18 38s
extracted methods to make main method moer concise and added code to … CI #76: Commit 9c98fb9 pushed by ashuaibi7
December 14, 2024 02:26 42s main
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December 14, 2024 02:26 42s
make exploration and script more user friendly CI #75: Commit 31534cb pushed by ashuaibi7
December 14, 2024 00:35 38s main
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December 14, 2024 00:35 38s
add todo statement for next step on verbose logging implementation CI #74: Commit e4c26ee pushed by ashuaibi7
December 14, 2024 00:17 44s main
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December 14, 2024 00:17 44s
uncommented lines to call CBaSE CI #73: Commit ed3b1b4 pushed by ashuaibi7
December 14, 2024 00:08 40s main
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December 14, 2024 00:08 40s
filename issues when reading and writing fixed CI #72: Commit 94404bb pushed by ashuaibi7
December 14, 2024 00:07 38s main
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December 14, 2024 00:07 38s
fixed filename output to exclude cancer subtype CI #71: Commit db932a9 pushed by ashuaibi7
December 14, 2024 00:03 37s main
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December 14, 2024 00:03 37s
fix incorrect filename when reading CBaSE output CI #70: Commit 795a733 pushed by ashuaibi7
December 14, 2024 00:02 38s main
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December 14, 2024 00:02 38s
fixed bugs with file input and output and naming for running external… CI #69: Commit 7ac0732 pushed by ashuaibi7
December 13, 2024 22:17 46s main
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December 13, 2024 22:17 46s
removed debugging print statement CI #68: Commit dd002ed pushed by ashuaibi7
December 13, 2024 21:23 37s main
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December 13, 2024 21:23 37s
fixed bug where some rows did not have 6 columns due to splitting on … CI #67: Commit ed78601 pushed by ashuaibi7
December 13, 2024 21:23 40s main
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December 13, 2024 21:23 40s
uncomment line to run CBaSE to obtain BMRs CI #66: Commit 35afdd1 pushed by ashuaibi7
December 13, 2024 21:12 47s main
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December 13, 2024 21:12 47s
add method to create pairwise results plots CI #65: Commit 1820c5c pushed by ashuaibi7
December 13, 2024 17:14 39s main
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December 13, 2024 17:14 39s
add method to compute expected number of mutations based on bmr pmf f… CI #64: Commit 7b00410 pushed by ashuaibi7
December 13, 2024 16:56 40s main
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December 13, 2024 16:56 40s
modify likelihood ratio statistic computation to estimate null based … CI #63: Commit c41f45d pushed by ashuaibi7
December 13, 2024 16:47 40s main
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December 13, 2024 16:47 40s
fix mismatched parenthesis CI #62: Commit 8a7448a pushed by ashuaibi7
December 13, 2024 16:38 46s main
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December 13, 2024 16:38 46s
removed todo re. verifying bmr pmfs contain counts since this is hand… CI #61: Commit 76e1393 pushed by ashuaibi7
December 13, 2024 16:32 38s main
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December 13, 2024 16:32 38s
modified log likelihood calculation to not default bmr pmf values to … CI #60: Commit aeacfbb pushed by ashuaibi7
December 13, 2024 16:30 36s main
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December 13, 2024 16:30 36s
add tostring method to easily display interaction CI #59: Commit a8f7448 pushed by ashuaibi7
December 13, 2024 16:25 39s main
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December 13, 2024 16:25 39s
add method to compute confusion matrix between binarized counts and m… CI #58: Commit eecb81b pushed by ashuaibi7
December 13, 2024 16:21 41s main
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December 13, 2024 16:21 41s
modified log likelihood computation to remove default value of 0 when… CI #57: Commit 2481916 pushed by ashuaibi7
December 13, 2024 16:02 41s main
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December 13, 2024 16:02 41s
call methods to estimate tau parameters between top interactions when… CI #56: Commit 0517223 pushed by ashuaibi7
December 12, 2024 20:24 39s main
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December 12, 2024 20:24 39s
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