v1.0.1

Bug fixed

output bug fixed: left kmers have chance to be right kmers.

v1.0.0

improvement

1. add column title for output files.
2. add version number.
3. contact info in help message.

paired-kmers first release

This is the first release of paired-kmers.

Paired-Kmers is a fast and memory-efficient k-mer based method to identify two regions that are close to each other but not necessarily contiguous for picking primers.

Importantly, we implemented column-based and row-based reduction methods to overcome memory bottleneck when analyzing species with large genome sizes and species with millions of different strains.