[pre-commit.ci] pre-commit autoupdate

.github/ISSUE_TEMPLATE/enhancement.md

@@ -8,7 +8,7 @@ ______________________________________________________________________
 #### Is your feature request related to a problem?
 
 Provide a description of what the problem is, e.g. "I wish I could use pytask-julia to
-do \[...\]".
+do [...]".
 
 #### Describe the solution you'd like
 

.pre-commit-config.yaml

@@ -1,6 +1,6 @@
 repos:
 -   repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.6.0
+    rev: v5.0.0
     hooks:
     -   id: check-added-large-files
         args: ['--maxkb=100']
@@ -25,7 +25,7 @@ repos:
     -   id: python-use-type-annotations
     -   id: text-unicode-replacement-char
 -   repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.4.4
+    rev: v0.9.6
     hooks:
       - id: ruff
       - id: ruff-format
@@ -34,7 +34,7 @@ repos:
     hooks:
     -   id: refurb
 -   repo: https://github.com/executablebooks/mdformat
-    rev: 0.7.17
+    rev: 0.7.22
     hooks:
     -   id: mdformat
         additional_dependencies: [
@@ -43,7 +43,7 @@ repos:
         ]
         args: [--wrap, "88"]
 - repo: https://github.com/codespell-project/codespell
-  rev: v2.2.6
+  rev: v2.4.1
   hooks:
     -   id: codespell
 -   repo: meta

src/pytask_julia/serialization.py

@@ -11,7 +11,7 @@
 from pytask import PTask
 from pytask import PTaskWithPath
 
-__all__ = ["create_path_to_serialized", "serialize_keyword_arguments", "SERIALIZERS"]
+__all__ = ["SERIALIZERS", "create_path_to_serialized", "serialize_keyword_arguments"]
 
 _HIDDEN_FOLDER = ".pytask/pytask-julia"
 

tests/conftest.py

@@ -20,7 +20,7 @@
 
 
 parametrize_parse_code_serializer_suffix = pytest.mark.parametrize(
-    "parse_config_code, serializer, suffix",
+    ("parse_config_code", "serializer", "suffix"),
     [
         ("import JSON; config = JSON.parse(read(ARGS[1], String))", "json", ".json"),
         ("import YAML; config = YAML.load_file(ARGS[1])", "yaml", ".yaml"),
@@ -87,6 +87,6 @@ def invoke(self, *args, **kwargs):
             return super().invoke(*args, **kwargs)
 
 
-@pytest.fixture()
+@pytest.fixture
 def runner():
     return CustomCliRunner()

tests/test_collect.py

@@ -4,14 +4,14 @@
 
 import pytest
 from pytask import Mark
+
 from pytask_julia.collect import SERIALIZERS
 from pytask_julia.collect import _parse_julia_mark
 from pytask_julia.collect import _parse_project
-
 from tests.conftest import ROOT
 
 
-@pytest.mark.unit()
+@pytest.mark.unit
 @pytest.mark.parametrize(
     (
         "mark",
@@ -91,7 +91,7 @@ def test_parse_julia_mark(  # noqa: PLR0913
         assert out == expected
 
 
-@pytest.mark.unit()
+@pytest.mark.unit
 @pytest.mark.parametrize(
     ("project", "root", "expected"),
     [

tests/test_config.py

@@ -4,7 +4,7 @@
 from pytask import build
 
 
-@pytest.mark.end_to_end()
+@pytest.mark.end_to_end
 def test_marker_is_configured(tmp_path):
     session = build(paths=tmp_path)
     assert "julia" in session.config["markers"]

tests/test_execute.py

@@ -11,14 +11,14 @@
 from pytask import Task
 from pytask import build
 from pytask import cli
-from pytask_julia.execute import pytask_execute_task_setup
 
+from pytask_julia.execute import pytask_execute_task_setup
 from tests.conftest import ROOT
 from tests.conftest import needs_julia
 from tests.conftest import parametrize_parse_code_serializer_suffix
 
 
-@pytest.mark.unit()
+@pytest.mark.unit
 def test_pytask_execute_task_setup_missing_julia(monkeypatch):
     """Make sure that the task setup raises errors."""
     # Act like julia is installed since we do not test this.
@@ -37,7 +37,7 @@ def test_pytask_execute_task_setup_missing_julia(monkeypatch):
 
 
 @needs_julia
-@pytest.mark.end_to_end()
+@pytest.mark.end_to_end
 @parametrize_parse_code_serializer_suffix
 @pytest.mark.parametrize("depends_on", ["'in_1.txt'", "['in_1.txt', 'in_2.txt']"])
 def test_run_jl_script(  # noqa: PLR0913
@@ -86,7 +86,7 @@ def task_run_jl_script():
 
 
 @needs_julia
-@pytest.mark.end_to_end()
+@pytest.mark.end_to_end
 @parametrize_parse_code_serializer_suffix
 def test_run_jl_script_w_task_decorator(
     runner, tmp_path, parse_config_code, serializer, suffix
@@ -123,7 +123,7 @@ def run_jl_script():
 
 
 @needs_julia
-@pytest.mark.end_to_end()
+@pytest.mark.end_to_end
 @parametrize_parse_code_serializer_suffix
 def test_raise_error_if_julia_is_not_found(
     tmp_path,
@@ -169,7 +169,7 @@ def task_run_jl_script():
 
 
 @needs_julia
-@pytest.mark.end_to_end()
+@pytest.mark.end_to_end
 @parametrize_parse_code_serializer_suffix
 def test_run_jl_script_w_wrong_cmd_option(
     runner,
@@ -208,7 +208,7 @@ def task_run_jl_script():
 
 
 @needs_julia
-@pytest.mark.end_to_end()
+@pytest.mark.end_to_end
 @pytest.mark.parametrize("n_threads", [2, 3])
 @parametrize_parse_code_serializer_suffix
 def test_check_passing_cmd_line_options(  # noqa: PLR0913
@@ -249,7 +249,7 @@ def task_run_jl_script():
 
 
 @needs_julia
-@pytest.mark.end_to_end()
+@pytest.mark.end_to_end
 @pytest.mark.xfail(
     condition=sys.platform == "win32" and os.environ.get("CI") == "true",
     reason="Test folder and repo are on different drives causing relpath to fail.",
@@ -303,7 +303,7 @@ def task_run_jl_script():
 
 
 @needs_julia
-@pytest.mark.end_to_end()
+@pytest.mark.end_to_end
 @pytest.mark.xfail(
     condition=sys.platform == "win32" and os.environ.get("CI") == "true",
     reason="Test folder and repo are on different drives causing relpath to fail.",
@@ -349,7 +349,7 @@ def task_run_jl_script():
 
 
 @needs_julia
-@pytest.mark.end_to_end()
+@pytest.mark.end_to_end
 def test_run_jl_script_w_custom_serializer(runner, tmp_path):
     task_source = f"""
     import pytask
@@ -382,7 +382,7 @@ def task_run_jl_script():
 
 
 @needs_julia
-@pytest.mark.end_to_end()
+@pytest.mark.end_to_end
 def test_run_jl_script_fails_w_multiple_markers(runner, tmp_path):
     task_source = """
     import pytask

tests/test_normal_execution_w_plugin.py

@@ -9,7 +9,7 @@
 from pytask import cli
 
 
-@pytest.mark.end_to_end()
+@pytest.mark.end_to_end
 @pytest.mark.parametrize(
     "dependencies",
     [(), ("in.txt",), ("in_1.txt", "in_2.txt")],

tests/test_parallel.py

@@ -27,7 +27,7 @@
 
 
 @needs_julia
-@pytest.mark.end_to_end()
+@pytest.mark.end_to_end
 @parametrize_parse_code_serializer_suffix
 def test_parallel_parametrization_over_source_files_w_loop(
     runner,
@@ -75,7 +75,7 @@ def task_execute_julia():
 
 
 @needs_julia
-@pytest.mark.end_to_end()
+@pytest.mark.end_to_end
 @parametrize_parse_code_serializer_suffix
 def test_parallel_parametrization_over_source_file_w_loop(
     runner,

tests/test_parametrize.py

@@ -12,7 +12,7 @@
 
 
 @needs_julia
-@pytest.mark.end_to_end()
+@pytest.mark.end_to_end
 @parametrize_parse_code_serializer_suffix
 def test_parametrized_execution_of_jl_script_w_loop(
     runner,

tests/test_shared.py

@@ -3,10 +3,11 @@
 from contextlib import ExitStack as does_not_raise  # noqa: N813
 
 import pytest
+
 from pytask_julia.shared import julia
 
 
-@pytest.mark.unit()
+@pytest.mark.unit
 @pytest.mark.parametrize(
     ("args", "kwargs", "expectation", "expected"),
     [