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Expand Up @@ -89,38 +89,38 @@ Solves a 2D Laplace problem using Finite Differences methods. The code is adapte

Runs a molecular dynamics simulation. The code is adapted from examples written by [J. Burkardt](https://people.sc.fsu.edu/~jburkardt/py_src/py_src.html)
## Development branch results
### Performance Comparison (as of Fri Jan 17 13:07:48 UTC 2025)
### Performance Comparison (as of Sun Jan 19 15:43:36 UTC 2025)
## Compilation time
Algorithm | python | pythran_gnu | pythran_intel | numba | pyccel_fortran_gnu | pyccel_c_gnu | pyccel_fortran_intel | pyccel_c_intel
------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | -------------------------
Ackermann | - | 2.32 | 2.13 | 0.34 | 1.34 | 1.30 | 1.45 | 1.39
Bellman Ford | - | 3.43 | 3.68 | 1.09 | 3.67 | 4.00 | 3.85 | 4.13
Dijkstra | - | 2.50 | 2.73 | 1.61 | 3.73 | 4.03 | 3.94 | 4.05
Euler | - | 2.77 | 3.12 | 2.07 | 3.70 | 4.05 | 3.90 | 4.07
Midpoint Explicit | - | 3.13 | 3.68 | 3.16 | 4.03 | 4.33 | 4.13 | 4.31
Midpoint Fixed | - | 3.75 | 4.29 | 3.39 | 4.14 | 4.57 | 4.26 | 4.60
RK4 | - | 4.11 | 4.58 | 4.14 | 4.44 | 4.85 | 4.56 | 4.80
FD - L Convection | - | 2.40 | 2.76 | 0.91 | 1.45 | 3.99 | 1.64 | 4.09
FD - NL Convection | - | 3.35 | 3.66 | 0.93 | 1.49 | 4.06 | 1.68 | 4.04
FD - Poisson | - | 3.56 | 3.92 | 1.37 | 1.58 | 4.19 | 2.96 | 4.12
FD - Laplace | - | 7.03 | 8.55 | 3.20 | 1.92 | 4.46 | 2.15 | 4.56
M-D | - | 6.80 | 7.21 | 4.30 | 4.60 | 4.71 | 4.77 | 4.93
Ackermann | - | 2.34 | 2.21 | 0.34 | 1.35 | 1.33 | 1.46 | 1.41
Bellman Ford | - | 3.53 | 3.90 | 1.22 | 3.83 | 4.32 | 3.91 | 4.11
Dijkstra | - | 2.41 | 2.77 | 1.63 | 3.83 | 4.31 | 3.98 | 4.12
Euler | - | 2.71 | 3.23 | 2.13 | 3.77 | 4.33 | 3.89 | 4.07
Midpoint Explicit | - | 3.10 | 3.65 | 3.18 | 4.02 | 4.59 | 4.16 | 4.29
Midpoint Fixed | - | 3.45 | 4.06 | 3.33 | 4.04 | 4.62 | 4.19 | 4.44
RK4 | - | 3.62 | 4.44 | 3.94 | 4.54 | 5.04 | 4.61 | 4.85
FD - L Convection | - | 2.36 | 2.74 | 0.91 | 1.45 | 4.30 | 1.61 | 4.02
FD - NL Convection | - | 3.32 | 3.82 | 0.93 | 1.45 | 4.28 | 1.59 | 4.01
FD - Poisson | - | 3.43 | 3.77 | 1.38 | 1.58 | 4.38 | 2.94 | 4.06
FD - Laplace | - | 6.93 | 8.38 | 3.13 | 1.90 | 4.69 | 2.07 | 4.38
M-D | - | 6.35 | 7.01 | 4.14 | 4.72 | 5.06 | 4.86 | 5.00

## Execution time
Algorithm | python | pythran_gnu | pythran_intel | numba | pyccel_fortran_gnu | pyccel_c_gnu | pyccel_fortran_intel | pyccel_c_intel
------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | ------------------------- | -------------------------
Ackermann (ms) | 291.00 | 2.87 | 3.04 | 9.60 | 1.50 | 1.59 | 8.72 | 3.92
Bellman Ford (ms) | 1850.00 | 5.24 | 3.41 | 3.93 | 3.00 | 6.15 | 4.37 | 19.20
Dijkstra (ms) | 4980.00 | 25.90 | 17.00 | 19.30 | 19.30 | 31.00 | 23.50 | 21.80
Euler (ms) | 3830.00 | 24.90 | 25.60 | 36.90 | 15.40 | 143.00 | 14.80 | 127.00
Midpoint Explicit (ms) | 7810.00 | 52.50 | 51.80 | 78.50 | 23.50 | 282.00 | 16.60 | 250.00
Midpoint Fixed (ms) | 39800.00 | 252.00 | 92.60 | 370.00 | 77.10 | 1430.00 | 62.80 | 1220.00
RK4 (ms) | 19900.00 | 160.00 | 35.70 | 137.00 | 34.60 | 496.00 | 37.70 | 405.00
FD - L Convection (ms) | 2300.00 | 1.64 | 1.61 | 2.70 | 1.63 | 1.62 | 1.49 | 4.09
FD - NL Convection (ms) | 2850.00 | 1.85 | 1.69 | 2.80 | 1.99 | 1.99 | 1.34 | 4.37
FD - Poisson (ms) | 6190.00 | 3.01 | 5.52 | 7.12 | 2.58 | 3.79 | 2.56 | 4.97
FD - Laplace (ms) | 577.00 | 68.00 | 143.00 | 246.00 | 63.30 | 256.00 | 58.30 | 273.00
M-D (ms) | 14800.00 | 15.20 | 52.90 | 58.90 | 53.70 | 59.30 | 91.40 | 63.30
Ackermann (ms) | 298.00 | 2.82 | 3.05 | 9.82 | 1.23 | 1.32 | 10.40 | 3.95
Bellman Ford (ms) | 2030.00 | 4.59 | 3.61 | 3.81 | 3.22 | 6.00 | 4.39 | 19.20
Dijkstra (ms) | 5300.00 | 18.90 | 17.00 | 19.60 | 19.60 | 31.00 | 24.30 | 22.40
Euler (ms) | 3900.00 | 25.60 | 25.40 | 37.30 | 14.90 | 145.00 | 15.10 | 128.00
Midpoint Explicit (ms) | 7930.00 | 51.60 | 49.80 | 69.40 | 23.00 | 274.00 | 16.60 | 256.00
Midpoint Fixed (ms) | 40100.00 | 267.00 | 91.50 | 358.00 | 75.00 | 1340.00 | 63.60 | 1210.00
RK4 (ms) | 20200.00 | 155.00 | 35.00 | 128.00 | 31.80 | 484.00 | 37.60 | 403.00
FD - L Convection (ms) | 2410.00 | 1.53 | 1.61 | 2.70 | 1.64 | 1.63 | 1.30 | 4.12
FD - NL Convection (ms) | 2910.00 | 1.84 | 1.68 | 2.81 | 1.98 | 2.23 | 1.52 | 4.14
FD - Poisson (ms) | 6450.00 | 2.80 | 5.76 | 7.17 | 2.58 | 3.78 | 2.61 | 5.10
FD - Laplace (ms) | 593.00 | 66.50 | 144.00 | 248.00 | 61.70 | 285.00 | 63.30 | 276.00
M-D (ms) | 16100.00 | 35.70 | 52.70 | 59.20 | 62.20 | 58.80 | 90.10 | 60.80

![Development compilation results](./version_specific_results/devel_performance_310_compilation.svg)
![Development execution results](./version_specific_results/devel_performance_310_execution.svg)
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