diff --git a/Dockerfile b/Dockerfile index 809df81b1..32d84a63b 100644 --- a/Dockerfile +++ b/Dockerfile @@ -15,7 +15,7 @@ RUN apt-get --allow-releaseinfo-change update && apt-get install -y \ python-pyqt5 \ vim -RUN conda install -y -cbioconda -cbiocore python=2.7 biopython pandas psutil pysam scons seaborn zlib pyyaml scikit-learn mafft # -cbioconda is for pysam, -cbiocore is for mafft +RUN conda install -y -cbioconda -cbiocore python biopython pandas psutil pysam scons seaborn zlib pyyaml scikit-learn mafft # -cbioconda is for pysam, -cbiocore is for mafft RUN conda update -y numpy # the previous command downgrades numpy (I'm not sure why), which breaks the seaborn import RUN pip install colored-traceback dendropy==4.4.0 levenshtein COPY . /partis