diff --git a/Dockerfile b/Dockerfile index f0a1c0470..c3d14e914 100644 --- a/Dockerfile +++ b/Dockerfile @@ -9,6 +9,8 @@ RUN apt-get --allow-releaseinfo-change update && apt-get install -y \ cmake \ emacs \ fonts-lato \ + git \ + less \ libboost-dev \ libgsl-dev \ libncurses-dev \ @@ -27,8 +29,8 @@ RUN micromamba install -y -c conda-forge -c bioconda -cbiocore -c etetoolkit \ mafft circlify ete3 RUN pip install colored-traceback dendropy levenshtein ENV XDG_RUNTIME_DIR=/tmp/xdgrd -RUN mkdir /tmp/xdgrd -RUN chmod 0700 /tmp/xdgrd +RUN mkdir $XDG_RUNTIME_DIR +RUN chmod 0700 $XDG_RUNTIME_DIR COPY --chown=$MAMBA_USER:$MAMBA_USER_GID . /partis WORKDIR /partis RUN ./bin/build.sh