diff --git a/src/ontology/fypo-edit.owl b/src/ontology/fypo-edit.owl index 244e47cc..18d95f56 100644 --- a/src/ontology/fypo-edit.owl +++ b/src/ontology/fypo-edit.owl @@ -8761,6 +8761,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -65402,7 +65406,6 @@ AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PomBase:mah") oboInOwl:hasExa AnnotationAssertion(oboInOwl:hasOBONamespace "fission_yeast_phenotype") AnnotationAssertion(oboInOwl:id "FYPO:0003664") AnnotationAssertion(rdfs:label "abolished RNA pyrophosphohydrolase activity") -EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) SubClassOf( ) @@ -132446,6 +132449,47 @@ AnnotationAssertion(oboInOwl:hasOBONamespace "normal cellular 1-IP7 level"@en) SubClassOf( ) +# Class: (sensitive to 1-chloro-2,4-dinitrobenzene) + +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PomBase:pc") "A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 1-chloro-2,4-dinitrobenzene (CDNB). Cells stop growing (and may die) at a concentration of 1-chloro-2,4-dinitrobenzene that allows wild type cells to grow.") +AnnotationAssertion(oboInOwl:created_by "vw") +AnnotationAssertion(oboInOwl:creation_date "2024-09-02T10:33:42Z"^^xsd:dateTime) +AnnotationAssertion(oboInOwl:hasOBONamespace "fission_yeast_phenotype") +AnnotationAssertion(rdfs:label "sensitive to 1-chloro-2,4-dinitrobenzene"@en) +SubClassOf( ) + +# Class: (increased cellular ceramide level) + +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PomBase:pc") "A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a ceramide measured in a cell higher than normal.") +AnnotationAssertion(oboInOwl:created_by "vw") +AnnotationAssertion(oboInOwl:creation_date "2024-09-02T10:41:06Z"^^xsd:dateTime) +AnnotationAssertion(oboInOwl:hasOBONamespace "fission_yeast_phenotype") +AnnotationAssertion(rdfs:label "increased cellular ceramide level"@en) +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +SubClassOf( ) + +# Class: (abnormal guanyl-nucleotide exchange factor activity) + +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PomBase:vw") "A molecular function phenotype in which a guanyl-nucleotide exchange factor activity is abnormal.") +AnnotationAssertion(oboInOwl:created_by "vw") +AnnotationAssertion(oboInOwl:creation_date "2024-09-02T10:48:48Z"^^xsd:dateTime) +AnnotationAssertion(oboInOwl:hasExactSynonym "abnormal GEF activity") +AnnotationAssertion(oboInOwl:hasOBONamespace "fission_yeast_phenotype") +AnnotationAssertion(rdfs:label "abnormal guanyl-nucleotide exchange factor activity"@en) +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +SubClassOf( ) + +# Class: (abolished guanyl-nucleotide exchange factor activity) + +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PomBase:vw") "A molecular function phenotype in which a guanyl-nucleotide exchange factor activity is absent.") +AnnotationAssertion(oboInOwl:created_by "vw") +AnnotationAssertion(oboInOwl:creation_date "2024-09-02T10:51:58Z"^^xsd:dateTime) +AnnotationAssertion(oboInOwl:hasExactSynonym "abolished GEF activity") +AnnotationAssertion(oboInOwl:hasOBONamespace "fission_yeast_phenotype") +AnnotationAssertion(rdfs:label "abolished guanyl-nucleotide exchange factor activity"@en) +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +SubClassOf( ) + # Class: (decreased rate of cytoplasmic microtubule polymerization during mitotic interphase) AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:36633091") Annotation(oboInOwl:hasDbXref "PomBase:mlr") "A microtubule cytoskeleton organization phenotype observed during mitotic interphase in which cytoplasmic microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule occurs at a lower rate, or speed, than normal.") diff --git a/src/ontology/imports/chebi_terms.txt b/src/ontology/imports/chebi_terms.txt index 5620dbde..65f31e0e 100644 --- a/src/ontology/imports/chebi_terms.txt +++ b/src/ontology/imports/chebi_terms.txt @@ -1,3 +1,6 @@ +CHEBI:34718 +CHEBI:24479 +CHEBI:24480 CHEBI:82625 CHEBI:23774 CHEBI:41033