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The server exited after the following error, which was caused by the VCF dataset directory in $vcfDir not matching the VCF datasetId created in Pretzel via spreadsheet upload.
server log extracts :
/app/lb3app/scripts/vcfGenotypeLookup.bash: line 440: cd: .../vcf/Fieldpea-SeedPurity: No such file or directory
echo Error: 0 'VCF dataset dir is not configured,' Fieldpea-SeedPurity, PWD=/
child process exited with code 0
cbWrap Error: Error: 0 VCF dataset dir is not configured, Fieldpea-SeedPurity, PWD=/
Error: Error: 0 VCF dataset dir is not configured, Fieldpea-SeedPurity, PWD=/
The text was updated successfully, but these errors were encountered:
The server exited after the following error, which was caused by the VCF dataset directory in $vcfDir not matching the VCF datasetId created in Pretzel via spreadsheet upload.
server log extracts :
/app/lb3app/scripts/vcfGenotypeLookup.bash: line 440: cd: .../vcf/Fieldpea-SeedPurity: No such file or directory
child process exited with code 0
cbWrap Error: Error: 0 VCF dataset dir is not configured, Fieldpea-SeedPurity, PWD=/
Error: Error: 0 VCF dataset dir is not configured, Fieldpea-SeedPurity, PWD=/
The text was updated successfully, but these errors were encountered: