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Initial implementation of hictk fix-mcool

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Codecov / codecov/patch failed Sep 29, 2023 in 1s

28.85% of diff hit (target 83.60%)

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28.85% of diff hit (target 83.60%)

Annotations

Check warning on line 35 in src/hictk/cli/cli.cpp

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@codecov codecov / codecov/patch

src/hictk/cli/cli.cpp#L35 

Added line #L35 was not covered by tests

Check warning on line 83 in src/hictk/cli/cli.cpp

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@codecov codecov / codecov/patch

src/hictk/cli/cli.cpp#L82-L83 

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Check warning on line 127 in src/hictk/cli/cli.cpp

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@codecov codecov / codecov/patch

src/hictk/cli/cli.cpp#L125-L127 

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Check warning on line 157 in src/hictk/cli/cli.cpp

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@codecov codecov / codecov/patch

src/hictk/cli/cli.cpp#L155-L157 

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Check warning on line 25 in src/hictk/cli/cli_fix_mcool.cpp

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@codecov codecov / codecov/patch

src/hictk/cli/cli_fix_mcool.cpp#L23-L25 

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Check warning on line 96 in src/hictk/cli/cli_fix_mcool.cpp

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@codecov codecov / codecov/patch

src/hictk/cli/cli_fix_mcool.cpp#L93-L96 

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Check warning on line 100 in src/hictk/cli/cli_fix_mcool.cpp

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@codecov codecov / codecov/patch

src/hictk/cli/cli_fix_mcool.cpp#L98-L100 

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Check warning on line 106 in src/hictk/cli/cli_fix_mcool.cpp

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@codecov codecov / codecov/patch

src/hictk/cli/cli_fix_mcool.cpp#L103-L106 

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Check warning on line 109 in src/hictk/cli/cli_fix_mcool.cpp

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@codecov codecov / codecov/patch

src/hictk/cli/cli_fix_mcool.cpp#L108-L109 

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Check warning on line 112 in src/hictk/cli/cli_fix_mcool.cpp

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@codecov codecov / codecov/patch

src/hictk/cli/cli_fix_mcool.cpp#L111-L112 

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Check warning on line 116 in src/hictk/cli/cli_fix_mcool.cpp

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@codecov codecov / codecov/patch

src/hictk/cli/cli_fix_mcool.cpp#L115-L116 

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Check warning on line 119 in src/hictk/cli/cli_fix_mcool.cpp

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@codecov codecov / codecov/patch

src/hictk/cli/cli_fix_mcool.cpp#L118-L119 

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Check warning on line 124 in src/hictk/cli/cli_fix_mcool.cpp

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@codecov codecov / codecov/patch

src/hictk/cli/cli_fix_mcool.cpp#L123-L124 

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Check warning on line 129 in src/hictk/cli/cli_fix_mcool.cpp

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@codecov codecov / codecov/patch

src/hictk/cli/cli_fix_mcool.cpp#L127-L129 

Added lines #L127 - L129 were not covered by tests

Check warning on line 131 in src/hictk/cli/cli_fix_mcool.cpp

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@codecov codecov / codecov/patch

src/hictk/cli/cli_fix_mcool.cpp#L131 

Added line #L131 was not covered by tests

Check warning on line 136 in src/hictk/cli/cli_fix_mcool.cpp

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@codecov codecov / codecov/patch

src/hictk/cli/cli_fix_mcool.cpp#L135-L136 

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Check warning on line 140 in src/hictk/cli/cli_fix_mcool.cpp

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@codecov codecov / codecov/patch

src/hictk/cli/cli_fix_mcool.cpp#L139-L140 

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Check warning on line 94 in src/hictk/convert/cool_to_hic.cpp

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@codecov codecov / codecov/patch

src/hictk/convert/cool_to_hic.cpp#L94 

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Check warning on line 110 in src/hictk/convert/cool_to_hic.cpp

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@codecov codecov / codecov/patch

src/hictk/convert/cool_to_hic.cpp#L110 

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Check warning on line 114 in src/hictk/convert/cool_to_hic.cpp

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@codecov codecov / codecov/patch

src/hictk/convert/cool_to_hic.cpp#L114 

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Check warning on line 189 in src/hictk/convert/cool_to_hic.cpp

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@codecov codecov / codecov/patch

src/hictk/convert/cool_to_hic.cpp#L189 

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Check warning on line 22 in src/hictk/fix_mcool/fix_mcool.cpp

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@codecov codecov / codecov/patch

src/hictk/fix_mcool/fix_mcool.cpp#L22 

Added line #L22 was not covered by tests

Check warning on line 25 in src/hictk/fix_mcool/fix_mcool.cpp

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@codecov codecov / codecov/patch

src/hictk/fix_mcool/fix_mcool.cpp#L24-L25 

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Check warning on line 28 in src/hictk/fix_mcool/fix_mcool.cpp

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@codecov codecov / codecov/patch

src/hictk/fix_mcool/fix_mcool.cpp#L27-L28 

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Check warning on line 40 in src/hictk/fix_mcool/fix_mcool.cpp

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@codecov codecov / codecov/patch

src/hictk/fix_mcool/fix_mcool.cpp#L34-L40 

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