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Implement hictk fix-mcool #68

Merged
merged 5 commits into from
Sep 30, 2023
Merged

Implement hictk fix-mcool #68

merged 5 commits into from
Sep 30, 2023

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robomics
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@robomics robomics changed the title Initial implementation of hictk fix-mcool Implement hictk fix-mcool Sep 29, 2023
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codecov bot commented Sep 29, 2023

Codecov Report

Merging #68 (2a84352) into main (b839765) will increase coverage by 0.09%.
Report is 4 commits behind head on main.
The diff coverage is 78.91%.

@@            Coverage Diff             @@
##             main      #68      +/-   ##
==========================================
+ Coverage   83.60%   83.69%   +0.09%     
==========================================
  Files          87       89       +2     
  Lines        6561     6697     +136     
==========================================
+ Hits         5485     5605     +120     
- Misses       1076     1092      +16     
Files Coverage Δ
src/hictk/balance/balance.cpp 76.78% <100.00%> (+3.57%) ⬆️
src/hictk/cli/cli_convert.cpp 80.61% <100.00%> (ø)
src/hictk/include/hictk/tools/cli.hpp 54.16% <ø> (ø)
src/hictk/main.cpp 65.38% <100.00%> (+0.91%) ⬆️
src/hictk/zoomify/zoomify.cpp 93.75% <100.00%> (+0.41%) ⬆️
...nclude/hictk/balancing/impl/sparse_matrix_impl.hpp 93.00% <100.00%> (+0.04%) ⬆️
...include/hictk/cooler/impl/multires_cooler_impl.hpp 86.02% <100.00%> (+0.84%) ⬆️
src/hictk/cli/cli.cpp 72.86% <81.81%> (+0.83%) ⬆️
src/hictk/convert/cool_to_hic.cpp 55.43% <33.33%> (ø)
src/hictk/fix_mcool/fix_mcool.cpp 86.66% <86.66%> (ø)
... and 1 more

... and 5 files with indirect coverage changes

@robomics robomics merged commit df8e7ba into main Sep 30, 2023
49 of 50 checks passed
@robomics robomics deleted the fix-mcool branch September 30, 2023 12:52
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