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Candidate for a Nextflow-based MVP #2

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Candidate for a Nextflow-based MVP

Candidate for a Nextflow-based MVP #2

Re-run triggered December 18, 2024 05:06
@GallVpGallVp
#528
GallVp:master
Status Failure
Total duration 1m 33s
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ci.yml

on: pull_request
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Matrix: test
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22 errors and 74 warnings
modules/gallvp/tirlearner/tests/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
modules/nf-core/ltrfinder/tests/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
tests/nf-test/tiny/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
modules/gallvp/helitronscanner/draw/tests/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
tests/nf-test/small/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
subworkflows/gallvp/fasta_helitronscanner_scan_draw/tests/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
modules/gallvp/gunzip/tests/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
modules/nf-core/cat/cat/tests/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
modules/gallvp/gunzip/tests/main.nf.test conda NF-24.10.3
Process completed with exit code 1.
modules/local/cleanup_tandem/tests/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
modules/nf-core/repeatmodeler/builddatabase/tests/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
modules/nf-core/repeatmodeler/repeatmodeler/tests/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
modules/local/format_helitronscanner_out/tests/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
modules/gallvp/annosine/tests/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
modules/nf-core/ltrretriever/ltrretriever/tests/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
modules/nf-core/ltrharvest/tests/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
modules/gallvp/helitronscanner/scan/tests/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
modules/gallvp/custom/shortenfastaids/tests/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
modules/nf-core/gunzip/tests/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
modules/nf-core/gunzip/tests/main.nf.test conda NF-24.10.3
Process completed with exit code 1.
modules/gallvp/custom/restoregffids/tests/main.nf.test singularity NF-24.10.3
Process completed with exit code 1.
confirm-pass
Process completed with exit code 1.
Check for changes
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/tirlearner/tests/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/tirlearner/tests/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/tirlearner/tests/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/ltrfinder/tests/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/ltrfinder/tests/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/ltrfinder/tests/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
tests/nf-test/tiny/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/helitronscanner/draw/tests/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/helitronscanner/draw/tests/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/helitronscanner/draw/tests/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
tests/nf-test/tiny/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
tests/nf-test/tiny/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
tests/nf-test/small/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
tests/nf-test/small/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
tests/nf-test/small/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
subworkflows/gallvp/fasta_helitronscanner_scan_draw/tests/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
subworkflows/gallvp/fasta_helitronscanner_scan_draw/tests/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
subworkflows/gallvp/fasta_helitronscanner_scan_draw/tests/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/gunzip/tests/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/cat/cat/tests/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/gunzip/tests/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/cat/cat/tests/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/gunzip/tests/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/local/cleanup_tandem/tests/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/cat/cat/tests/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/local/cleanup_tandem/tests/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/local/cleanup_tandem/tests/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/repeatmodeler/builddatabase/tests/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/repeatmodeler/builddatabase/tests/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/repeatmodeler/repeatmodeler/tests/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/repeatmodeler/builddatabase/tests/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/repeatmodeler/repeatmodeler/tests/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/repeatmodeler/repeatmodeler/tests/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/local/format_helitronscanner_out/tests/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/local/format_helitronscanner_out/tests/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/local/format_helitronscanner_out/tests/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/annosine/tests/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/annosine/tests/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/annosine/tests/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/ltrretriever/ltrretriever/tests/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/ltrretriever/ltrretriever/tests/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/ltrretriever/ltrretriever/tests/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/ltrharvest/tests/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/ltrharvest/tests/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/helitronscanner/scan/tests/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/ltrharvest/tests/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/helitronscanner/scan/tests/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/helitronscanner/scan/tests/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/custom/shortenfastaids/tests/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/custom/shortenfastaids/tests/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
subworkflows/nf-core/utils_nfschema_plugin/tests/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
subworkflows/nf-core/utils_nfschema_plugin/tests/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/custom/shortenfastaids/tests/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/gunzip/tests/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
subworkflows/nf-core/utils_nfschema_plugin/tests/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/gunzip/tests/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/custom/restoregffids/tests/main.nf.test docker NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/nf-core/gunzip/tests/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/custom/restoregffids/tests/main.nf.test conda NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
modules/gallvp/custom/restoregffids/tests/main.nf.test singularity NF-24.10.3
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
confirm-pass
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636