Repositories list

• dogfish-inside

  Public
  Stock Assessment for Inside Dogfish Stock in British Columbia

  R

  •0•0•2•0•Updated Feb 1, 2025Feb 1, 2025

• pacea

  Public
  An R package of Pacific ecosystem information to help facilitate an ecosystem approach to fisheries management.

  HTML

  •

  Other

  •0•14•30•0•Updated Jan 31, 2025Jan 31, 2025

• sdmTMB

  Public
  🌎 An R package for spatial and spatiotemporal GLMMs with TMB

  spatial-analysisecologyglmm+ 3species-distribution-modellingtmbr

  R

  •27•197•50•2•Updated Jan 30, 2025Jan 30, 2025

• csasdown

  Public
  📖 An R package for creating CSAS reports in PDF or Word format with R Markdown and bookdown

  rlatexpandoc+ 1rmarkdown

  R

  •

  Other

  •17•49•17•1•Updated Jan 29, 2025Jan 29, 2025

• gfdata

  Public
  💾 An R package for data extraction of BC groundfish data

  R

  •0•1•15•0•Updated Jan 23, 2025Jan 23, 2025

• gfplot

  Public
  📈 An R package for plotting of BC groundfish data

  R

  •3•2•9•1•Updated Jan 10, 2025Jan 10, 2025

• dogfish-assess

  Public
  Scheme

  •1•0•6•0•Updated Jan 9, 2025Jan 9, 2025

• gfcondition

  Public
  R

  •0•0•0•0•Updated Jan 8, 2025Jan 8, 2025

• herringutils

  Public
  🔧 Utilities for Herring documents based on https://github.com/pbs-assess/gfiscam models

  R

  •0•0•5•0•Updated Jan 8, 2025Jan 8, 2025

• renewassess

  Public
  Discussion board for stock assessment renewal group

  HTML

  •0•0•4•0•Updated Jan 6, 2025Jan 6, 2025

• dogfish-trends

  Public
  Coastwide Pacific Spiny Dogfish trends

  ecologyspatiotemporalsdm+ 4gmrfgroundfishsdmtmbdogfish

  R

  •0•0•15•0•Updated Jan 6, 2025Jan 6, 2025

• herringsr

  Public
  📎 🐟 Herring Science Response document

  TeX

  •1•0•14•0•Updated Jan 6, 2025Jan 6, 2025

• cpue-reports

  Public
  📚 Standardized commercial catch-per-unit-effort reports for Pacific groundfish

  R

  •0•2•0•0•Updated Dec 17, 2024Dec 17, 2024

• gfsynopsis

  Public
  🐟 A reproducible data synopsis report for over 100 species of British Columbia groundfish

  r-packager-statsvisualization+ 1fisheries

  TeX

  •1•16•15•0•Updated Dec 4, 2024Dec 4, 2024

• gftrends

  Public
  Trends in Pacific Canadian groundfish stock status

  R

  •0•0•8•0•Updated Dec 3, 2024Dec 3, 2024

• herringfsar

  Public
  Herring stock assessment document

  HTML

  •0•0•2•0•Updated Nov 29, 2024Nov 29, 2024

• rosettafish

  Public
  🎣 An R package for translating fish- and fisheries-related terms

  R

  •15•4•5•0•Updated Nov 14, 2024Nov 14, 2024

• lingcod-inside

  Public
  Stock Assessment for Inside Lingcod Stock in British Columbia

  R

  •0•0•0•0•Updated Nov 7, 2024Nov 7, 2024

• arrowtooth

  Public
  https://pbs-assess.github.io/arrowtooth/

  R

  •0•0•1•0•Updated Oct 24, 2024Oct 24, 2024

• gfiscamutils

  Public
  🔨 Utilities for https://github.com/pbs-assess/gfiscam models, including loading, plotting, and table-making

  R

  •1•0•3•0•Updated Oct 21, 2024Oct 21, 2024

• pacea-data

  Public
  A data repository for very large data sets that get used by the pacea package

  GNU General Public License v3.0

  •0•0•0•0•Updated Oct 10, 2024Oct 10, 2024

• DDRTMB

  Public
  A delay-difference model written in RTMB

  Smarty

  •

  GNU General Public License v3.0

  •0•0•2•0•Updated Sep 25, 2024Sep 25, 2024

• gengamma

  Public
  R

  •0•0•0•0•Updated Sep 5, 2024Sep 5, 2024

• git-course

  Public
  A repository for teaching the fundamentals of GIT

  TeX

  •80•5•1•0•Updated Sep 4, 2024Sep 4, 2024

• stme-book

  Public
  Notes and code working through 'Spatio-Temporal Models for Ecologists'

  R

  •

  GNU General Public License v3.0

  •0•9•0•0•Updated Aug 19, 2024Aug 19, 2024

• sdmTMB-teaching

  Public
  🧑‍🎓 Workshops on the R package sdmTMB

  HTML

  •

  GNU General Public License v3.0

  •6•19•0•0•Updated Jul 31, 2024Jul 31, 2024

• gfcommercial

  Public
  Groundfish Commercial Biosampling Compendium

  TeX

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jul 12, 2024Jul 12, 2024

• sdmTMBextra

  Public
  🔨 Extra tools for working with sdmTMB models

  TeX

  •1•3•1•0•Updated Jun 18, 2024Jun 18, 2024

• seesaw

  Public
  Diagnosing causes of the 'seesaw' effect in survey indices

  R

  •0•0•1•0•Updated Jun 14, 2024Jun 14, 2024

• petrale

  Public
  R

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jun 5, 2024Jun 5, 2024