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23 repositories
ccs-prediction
PublicEvaluating the generalizability of graph neural networks for predicting collision cross sectionnp-clinical-trials
PublicSource code and data for "Natural products have increased rates of clinical trial success throughout the drug development process"sparc-multiomics
PublicSPARC CCF Multi-omics analysisRPath
PublicSource code and data for "Causal reasoning over knowledge graphs leveraging drug-perturbed and disease-specific transcriptomic signatures for drug discovery"plant-chemical-space
PublicSource code and data for "Exploring the known chemical space of the plant kingdom: Insights into taxonomic patterns, knowledge gaps, and bioactive regions"- Scripts and notebooks from Weighting low-intensity MS/MS ions and m/z frequency for spectral library annotation
- Source code and data repository for "Ensembles of knowledge graph embedding models improve predictions for drug discovery"
mspaint
Publicsinusoidal-embedding
Publicethnobotany
PublicSource code and data for "Modern drug discovery using ethnobotany: A large-scale cross-cultural analysis of traditional medicine reveals common therapeutic uses"sapbert
Publictimsconvert
Public archivedeconv_benchmark
Publichgraph2graph
Publicnbdev-demo
Public archivebiomedical-nlp-datasets
PubliccommonMZ
Publicmisosoup-preview
Public archivespec2tax
PublicGenBioEL
PubliclibPeak
Public archivebiosaur_adapter
Public archive